Gene AFE_0279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0279 
Symbol 
ID7137167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp252126 
End bp252473 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content58% 
IMG OID643528692 
Productlipoprotein, SmpA/OmlA family 
Protein accessionYP_002424787 
Protein GI218666830 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2913] Small protein A (tmRNA-binding) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAGCT TCCGCCTGAT TATTTTGCTT ACTTTCTGTG CCCTGCCGCT TGGCGCCTGC 
AGTATTTACC GCGTCGATGT GCAACAGGGC AATGTCATCA CCGCCAAGGA GCTGGCTGAA
CTGCACCCGG GTATGGATAA GCTGCAGGTG CGCGCCATCC TTGGCTCGCC ACTCCTGCAG
AACCCTTGGC ATCCCCATCA GTGGGTGTAT GCCTACAGCT TCAAGCCGGC CTATGGCAAT
ACGGAGGTCC GCAAGGTTCT GGTGCTTTTT GACAAGGACG ACAAGCTGAC CGGCGTGCAG
GGAGACGTAC GGAGCACCAC GCCGACGACA GCGGCCACTG CGTCTTAG
 
Protein sequence
MRSFRLIILL TFCALPLGAC SIYRVDVQQG NVITAKELAE LHPGMDKLQV RAILGSPLLQ 
NPWHPHQWVY AYSFKPAYGN TEVRKVLVLF DKDDKLTGVQ GDVRSTTPTT AATAS