Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0279 |
Symbol | |
ID | 7137167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 252126 |
End bp | 252473 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643528692 |
Product | lipoprotein, SmpA/OmlA family |
Protein accession | YP_002424787 |
Protein GI | 218666830 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2913] Small protein A (tmRNA-binding) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAGCT TCCGCCTGAT TATTTTGCTT ACTTTCTGTG CCCTGCCGCT TGGCGCCTGC AGTATTTACC GCGTCGATGT GCAACAGGGC AATGTCATCA CCGCCAAGGA GCTGGCTGAA CTGCACCCGG GTATGGATAA GCTGCAGGTG CGCGCCATCC TTGGCTCGCC ACTCCTGCAG AACCCTTGGC ATCCCCATCA GTGGGTGTAT GCCTACAGCT TCAAGCCGGC CTATGGCAAT ACGGAGGTCC GCAAGGTTCT GGTGCTTTTT GACAAGGACG ACAAGCTGAC CGGCGTGCAG GGAGACGTAC GGAGCACCAC GCCGACGACA GCGGCCACTG CGTCTTAG
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Protein sequence | MRSFRLIILL TFCALPLGAC SIYRVDVQQG NVITAKELAE LHPGMDKLQV RAILGSPLLQ NPWHPHQWVY AYSFKPAYGN TEVRKVLVLF DKDDKLTGVQ GDVRSTTPTT AATAS
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