Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0236 |
Symbol | |
ID | 7135236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 213206 |
End bp | 213886 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643528648 |
Product | hypothetical protein |
Protein accession | YP_002424743 |
Protein GI | 218668152 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2365] Protein tyrosine/serine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACCC CTCTGGTGCT CCTGCCAGAC GAGCGCCGCC GCTATCGGCG CCATCAGTTC TGGACGGATC ACGGCATTTT CCGCGAACTG TTTTATGCAA ACTTTCACGA GATTGCGCCA GGGGTGTTTC GCTCGGCCCA GCCGTCGCCG GTCCAGTTAC GGCACTGGCA GCAAAAGTAT GGTCTCTGCA CGGTATTGAA CCTGCGTGCC CCGGCACCCC ACGAACCCCA TTACCGTCTG GAGCAGGAGG CTTGTGATGC CCTGGGCATG ACGCACCTGA CCCTGCACGG CTTCGGCTCC CGGGATCTGC CGGAACGCGA CAAGTTGCTG GCGGGCATAG CGGTGCTGGA TCAATTACCC CAACCTTTTT TGCTGCATTG CAAATCCGGC GCGGATCGGG CCGGTTTCAT CAGCGTGCTC TATCTGCATC TGGTGCTGGG GATACCCCTC AGCGCGGCGC AGCGGCAACT GCGCTTGTGG CCTTTCGGTC ATATCCGGCA CGCCAATACC GGCATTCTCG ACTGGTTTTT CGTCAATTAC CACGATGCTG CCGCCTGCCA GCCCGGCTTG ACCCTGCGTG CCTGGATCCA GGACGGGTAT GATCGCGAGC ACATCCTGAA AAACTTCCGG CCCTGGTATC GTCTGGACTG GCTGACCGAC CGTATTTTGC ACCGCGAATG A
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Protein sequence | MKTPLVLLPD ERRRYRRHQF WTDHGIFREL FYANFHEIAP GVFRSAQPSP VQLRHWQQKY GLCTVLNLRA PAPHEPHYRL EQEACDALGM THLTLHGFGS RDLPERDKLL AGIAVLDQLP QPFLLHCKSG ADRAGFISVL YLHLVLGIPL SAAQRQLRLW PFGHIRHANT GILDWFFVNY HDAAACQPGL TLRAWIQDGY DREHILKNFR PWYRLDWLTD RILHRE
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