Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0037 |
Symbol | |
ID | 7135076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 40123 |
End bp | 41025 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643528454 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002424551 |
Protein GI | 218665063 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.279269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACCTGC GTCATCTGCG CCATTTTGTC GTGCTCGCCG AGGCCCTGAA CTTTCATCGG GCGGCGACTC GCCTGCATCT CGCCCAGCCC TCCCTGAGCC GCAGCATCCG CGCTCTGGAA GAGGAGATCG GTCTGCCGCT TTTTTTGCGC AACCAGCGGG AAGTCTCCCT CACGGCCGCC GGTCGGGTGC TCCTGCCCGA AGCCCGACAA TTGCTGGCGC AGGCGCGGCG CACGGAGGCT CTGCTCGGCG ATCTGCAAAA CGGGCAGGCC GGCACCCTGC GGATCGGCTT TCTTGCCTCC ACCGCCATCG CCCTTCTGCC TGGGCTGTTG CGCGGTTTTC GTCAGCACTT TTCGCAGGTG CATCTGGAGT TGCGGGAGAT GAGCAGCGAT GCGCAGTTGC AGGCCCTGCG CGATGACCAG ATCGATATCG GCTTCATCCG CGATATCGGC ATCCTGCCGG ATATCCACCA GCATCTGCTG CAACGGGAGG CGCTGATGCT GGTGCTCCCG GAGGATCATC CCTTCGCCGC AGAGAGCGCC ATAGCCCTCC ATCGCCTGCA CCATGAGTCG TTGATTCTCC TGCGCCGCGA GGTGGCACCA GCGTCCTATG ACCGCATCCT TGCCCAATGC CACATCCATG CCCTGAAGCC ACATATCCTG ATGGAACTCG CCGATTCCAA TGCCGTGTTC AGCGCGGTCT TGGCGGGCCT CGGACTGGGT TTCCTGTTCT CGGCCTTTGC GGAAATTCAA CGTCCGGGAA TCGTCTTCCG ACCGCTGGCG GATGTCCTGG GAGACAGTGA GGTAAGTCTC GCCTGGCGCG GACGACAGGA GGACGGAAAT CCGGCAGCGC GAACTTTTGT AACCATGGTG CAGCAGCGAT ATGCGCTGCA GGCCCAGCCC TGA
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Protein sequence | MDLRHLRHFV VLAEALNFHR AATRLHLAQP SLSRSIRALE EEIGLPLFLR NQREVSLTAA GRVLLPEARQ LLAQARRTEA LLGDLQNGQA GTLRIGFLAS TAIALLPGLL RGFRQHFSQV HLELREMSSD AQLQALRDDQ IDIGFIRDIG ILPDIHQHLL QREALMLVLP EDHPFAAESA IALHRLHHES LILLRREVAP ASYDRILAQC HIHALKPHIL MELADSNAVF SAVLAGLGLG FLFSAFAEIQ RPGIVFRPLA DVLGDSEVSL AWRGRQEDGN PAARTFVTMV QQRYALQAQP
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