Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_15631 |
Symbol | |
ID | 4718290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | + |
Start bp | 1339412 |
End bp | 1340161 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640079289 |
Product | NAD-dependent DNA ligase N-terminus |
Protein accession | YP_001009953 |
Protein GI | 123969095 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.637267 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATT TATTAGTGAG AGATGTTAAG TATCTTGATG AACAATACAG AATAGGTGAA GGCATAATTT CGGATGATGC ATTTAAGCAA CTAGAAAAGC TCTTTATTCC TGTTGATCCA GAGCCTGACT ACTTTAATCA AAAAAATAAT AAACTTTTGC CAAAATTAGC CAAAGAAAAC TATAAAAAAT TTTTGGAAAG TTTATTAACA AAAACAAGAT TAAGCATTCA ACCAAAAATT GATGGCTGTG CTATTGCAAT TAGATATATA GATGGCAAGT TTAATAAAGC TATTACAAAA AAAGGATTTG ATGTATCAAG CAAAATTAAA CAAATTAAAA ATGTCCCCGA TTGTATTCCT ATCAAACGAG ATTTTCAAAT TAGAGGTGAA CTATACGCTA CAAACCAAGT TGCCGGCATT TCCCAAAGAA TTACAAGAAA ATACCTCAAT GATAAGAAAG GGATTGGAGA AAGTCTCCGC TTTTGCTGTT TCGAAATACT TAATGGAAGA CTTAATCAAT ACGAAACCCT TAACTATCTT AAAAAATGTG GCTTCAGCAC CCCTGACAGT TACTTCACAA ATCATACAAG CGAAATCCAA ATATATAAAA AAAATTGGTT AGAGAAAAAA ATATTTGAGA AATATCCAAC TAATGGGATA GTTATAAAAA TAAATAGTAG GAAATTAAAG TTACTTAGAG AGAAAAGTTT ATCTCAAAAT AACGAATGGC AATATGCAAT TGAAAGATAA
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Protein sequence | MNNLLVRDVK YLDEQYRIGE GIISDDAFKQ LEKLFIPVDP EPDYFNQKNN KLLPKLAKEN YKKFLESLLT KTRLSIQPKI DGCAIAIRYI DGKFNKAITK KGFDVSSKIK QIKNVPDCIP IKRDFQIRGE LYATNQVAGI SQRITRKYLN DKKGIGESLR FCCFEILNGR LNQYETLNYL KKCGFSTPDS YFTNHTSEIQ IYKKNWLEKK IFEKYPTNGI VIKINSRKLK LLREKSLSQN NEWQYAIER
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