Gene A9601_15571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_15571 
Symbol 
ID4718283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand
Start bp1334913 
End bp1335704 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content30% 
IMG OID640079282 
ProductS4-like domain-containing protein 
Protein accessionYP_001009947 
Protein GI123969089 
COG category[S] Function unknown 
COG ID[COG2302] Uncharacterized conserved protein, contains S4-like domain 
TIGRFAM ID[TIGR03069] photosystem II S4 domain protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGACT TAAAAGAGAT CTTAATAAAT GCAAACTACA AAAAAGAAAC TGAGGAATTA 
ATAAATATTG CTAACTTAGC CTACAAACAC TGGGAAACTT ATTGGACAGG GTTTAATTCA
ACTTATGTTT GCGAAGAAAT TTTAAAAGAT TTTGAAAATT TAAATGATTT CAAATTTTTT
ATTTATGGAG GATTCTCCTC TTCTCAAAGA TCTAGGATAG CTTGCTTTAG AGGAGATAAT
ATTCCTGAAG AGGATGCACT AAAAAGTAAT TTTCCAGCTC AAGGAATAAA AATTAATGGG
AATTTTTTAT TTGATAATGC TACACAAGAC GACTTTAGAT CCCTTTTAAT TGAAAATGGG
GTTAATCAAA TAAAAGTTGG AGATATATGG ACCATTGGCG ATAGGGGAGC ACAAGGGATA
ATTGATAATT CAAATATAAA GCATCTAGAT GAAAAGATTT TTTATTTAAG AGACGTAAAA
GTAAAAGTTA ATGTAGTAGG TATAGATGAA TTACAAATAC CTTCTGGAAG ATCAAAAAAA
CTTGTCAATA CTGTAGAAGC TTCAACAAGA TTAGATGCTA TAGCATCAGC TGGCTTTAGG
GTATCACGAA CCAAAATCAT TGAAAGGATA GAGAATGGAA TGCTCAGATT AAATGGAAGC
AAAGTTAATA AGCCAACAAT TAATCTAAAA ATTGGCGACA AACTAGAACT TGAAAATAAA
GGATTTATCG AAATTCTAAA TTTAGAAATA ACCAAAAGAG AACGATGGAA AGTTAAATTA
CTTAGAAAAT GA
 
Protein sequence
MIDLKEILIN ANYKKETEEL INIANLAYKH WETYWTGFNS TYVCEEILKD FENLNDFKFF 
IYGGFSSSQR SRIACFRGDN IPEEDALKSN FPAQGIKING NFLFDNATQD DFRSLLIENG
VNQIKVGDIW TIGDRGAQGI IDNSNIKHLD EKIFYLRDVK VKVNVVGIDE LQIPSGRSKK
LVNTVEASTR LDAIASAGFR VSRTKIIERI ENGMLRLNGS KVNKPTINLK IGDKLELENK
GFIEILNLEI TKRERWKVKL LRK