Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_13841 |
Symbol | |
ID | 4718104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | + |
Start bp | 1150972 |
End bp | 1153137 |
Gene Length | 2166 bp |
Protein Length | 721 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640079104 |
Product | polynucleotide phosphorylase/polyadenylase |
Protein accession | YP_001009775 |
Protein GI | 123968917 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAAGGAC AAAATAAGTC GATCACGTTT GACGGACGAG AGATACGACT AACTACAGGA CTATACGCTC CTCAAGCAAG TGGATCAGTA ATGATTGAGT GTGGTGATAC CTCACTATTA GTTACAGCTA CAAAAACTGC CAAAAAAGAA CCATCAGACT TTCTCCCTCT GATATGCGAC TATGAAGAAA AACTTTTTGC TGCAGGGAGA ATTCCTGGTG GTTTTATGAG GAGAGAAGGT CGCCCACCAG AAAGAGCGAC TTTAATTGCA AGATTAATTG ATAGGCCAAT GAGGCCACTT TTCCCCACAT GGATGGGGGA TGAGATTCAA ATAGTCGCAT CATGCCTTTC TCTAGATGAA AGAGTTCCAG CAGATGTTTT GGCTGTTACC GGGGCTTCAA TAGCAACTTT AGTTGGAGAG ATTCCATTTT ATGGGCCAAT GGCTGCTGTA AGAGTTGGGC TGATAGGCGA TGATTTCATC TTAAATCCTA GTTATAGAGA GATTGAAAAG GGAGATTTAG ACATTGTTGT TGCAGGATCA CCAGACGGTA TCGTCATGAT TGAAGCAGGT GCAAATCAAT TGTCAGAGCA AGATACAATC GAAGCTATAG ATTTCGGATA TGAGGCTGTT ACTGAACTTA TTAAATCGCA AGAAGATTTA CTACAAGATT TAGGAATAAA ACAGATTAAG CCATCTGAAC CTGAAGAAGA TAAAACATTA CCCTCTTATT TAGAGAAAAA TTGTACAAAA CCTATTGAGT TAGTTTTAAA GAAATTTGAC CTTTCAAAGG AAGAAAGAGA TCTTGAACTC GAAAAAATTA AAACTGAAAC TCAAAGCAAA ATTGATTCAC TTAAAGATGA CAATCAAGTA AAAGTTCTAA CCTCAGAAAA TGAAAAATTG CTTCATTCCG ACTTTAAAAA ATTAACAAAA AAATTAATGA GGTCGCAAAT CATAAATGAT GGGAAAAGAG TTGATGGAAG GGATCTCGAT GAAGTTAGAA AAATATCAGC CTCTGCAGGA ATTCTTCCAA AAAGAGTTCA TGGCTCTGCA CTTTTTCAAA GAGGCCTAAC TCAAGTCTTA TCTACTACTA CTCTTGGCAC GCCAAGCGAT GCGCAAGAGA TGGATGATTT AAATCCAAGT ACTGAAAAAA CATATTTGCA TCACTATAAT TTTCCTCCTT ATTCAGTGGG AGAAACAAGA CCAATGAGAA CTCCAGGCAG AAGAGAAATT GGTCATGGAG CATTAGCTGA AAGAGCAATA ATACCTGTGC TGCCTGGTAA AGAAACATTT CCTTATGTTT TAAGGGTAGT AAGTGAAGTT TTAAGTTCTA ACGGATCAAC CTCAATGGGT TCTGTATGCG GCAGCACTCT TTCGTTACTA GATGCAGGAG TCCCTTTAAA GGCTCCTGTA AGTGGGACTG CTATGGGCTT AATCAAGGAA GGTAAAGAAG TCCGAATTCT CACAGATATT CAAGGAATTG AAGACTTTCT TGGAGACATG GACTTTAAAG TTGCAGGTAC TGACAAGGGT ATAACCGCTT TACAAATGGA TATGAAAATT ACAGGCTTAC CAGTATCTAT TATTTCTGAT GCAATTAAAA AAGCTCGTCC TGCAAGAATA CATATTTTAG AAAAGATGCA AGGGGCAATA GATAAGCCTC AAGAATCTCT TTCTCCTCAT GCCCCCCGAC TTTTAAGCTT TAGAATTGAC CCTGAGCTTA TAGGAACAGT TATTGGACCC GGCGGTAGAA CTATCAAAGG AATCACTGAA AGAACAAATA CAAAAATAGA TATAGAAGAT GGTGGCATTG TAACTATTGC TTCTCATGAT GGAGCTGCGG CAGAGGAAGC TCAAAAGATA ATAGAAGGAT TAACACGAAA GGTTCATGAA GGTGAGATTT TCTCCGGAGT CGTAACACGA ATAATACCAA TAGGTGCTTT TGTAGAAATA TTGCCAGGCA AAGAAGGGAT GGTTCACATT TCTCAATTAT CTGAAGCAAG GGTGGAGAGA GTCGAAGATG TAGTAAGGCA AGGTGATGAA GTAACCGTAA GAGTTAGAGA GATTGATAGT AGAGGGAGAA TTAATCTTAC TTTGAGAGGA GTAGGCCAAA ATAATGGAAT GTCTTATCCA GAACCAACTC CTACTCCAGT TGCTCCGCTT AATTAA
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Protein sequence | MEGQNKSITF DGREIRLTTG LYAPQASGSV MIECGDTSLL VTATKTAKKE PSDFLPLICD YEEKLFAAGR IPGGFMRREG RPPERATLIA RLIDRPMRPL FPTWMGDEIQ IVASCLSLDE RVPADVLAVT GASIATLVGE IPFYGPMAAV RVGLIGDDFI LNPSYREIEK GDLDIVVAGS PDGIVMIEAG ANQLSEQDTI EAIDFGYEAV TELIKSQEDL LQDLGIKQIK PSEPEEDKTL PSYLEKNCTK PIELVLKKFD LSKEERDLEL EKIKTETQSK IDSLKDDNQV KVLTSENEKL LHSDFKKLTK KLMRSQIIND GKRVDGRDLD EVRKISASAG ILPKRVHGSA LFQRGLTQVL STTTLGTPSD AQEMDDLNPS TEKTYLHHYN FPPYSVGETR PMRTPGRREI GHGALAERAI IPVLPGKETF PYVLRVVSEV LSSNGSTSMG SVCGSTLSLL DAGVPLKAPV SGTAMGLIKE GKEVRILTDI QGIEDFLGDM DFKVAGTDKG ITALQMDMKI TGLPVSIISD AIKKARPARI HILEKMQGAI DKPQESLSPH APRLLSFRID PELIGTVIGP GGRTIKGITE RTNTKIDIED GGIVTIASHD GAAAEEAQKI IEGLTRKVHE GEIFSGVVTR IIPIGAFVEI LPGKEGMVHI SQLSEARVER VEDVVRQGDE VTVRVREIDS RGRINLTLRG VGQNNGMSYP EPTPTPVAPL N
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