Gene A9601_13791 details

Gene Information

• Locus tag: A9601_13791
• Symbol: yidC
• ID: 4718099
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. AS9601
• Kingdom: Bacteria
• Replicon accession: NC_008816
• Strand: +
• Start bp: 1145320
• End bp: 1146462
• Gene Length: 1143 bp
• Protein Length: 380 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 640079099
• Product: putative inner membrane protein translocase component YidC
• Protein accession: YP_001009770
• Protein GI: 123968912
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0706] Preprotein translocase subunit YidC
• TIGRFAM ID: [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.429072
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATAGGGT TCATTTCTGA AAAACTACTT ATCCCGATTC TAGATTTTTT CTATGGCCTA 
GTACCCAGCT ACGGATTGGC GATTGTTGCA CTAACAGTAG TAATAAGGAT TGCTCTTTTC 
CCTTTAAGTG CTGGGTCAAT TAGAAGTGCA AGAAGAATGA AAATTGCACA ACCAGTAATG 
CAAAAAAAGC AAGCAGAAAT AAAATCTAAG TTTTCAGGTG ATCCAAAGAA ACAGCAAGAA 
GAATTAGGAA AATTAATGAA TGAGTTTGGC AGTCCTCTTG CAGGTTGCCT TCCTTTGATT 
GTCCAAATGC CCGTGCTATT TGCATTGTTT GCAACCCTTA GAGGATCTCC ATTTGCTGAT 
GTTCCTTACA ACATAAATCT TAAGGTCGTC CCTCAAGATC AAATTGCTGC TATTGACCCA 
AAACCCTATA AATCACCAAG ACATTCTATT TTTATTACAG AAAAATCACA TTTTCCTGTA 
GTAGCAACTA TTCCAAATGG AACAAAATTA GGTACAGAAG ATTCAATAAA AATAAATTTG 
CAAACAACAA ATGGAAATAG CTACTCAGAA GTTTTATCCA ATTACGAAAA TGGATCCAAA 
TTCCTCCCTA CTTGGACGGT TTCAAAAGGT TCTGAAAATT TAAAAGTTTC CCAAGACGGT 
ACAGTCACTG CAATTAAACC AGGCGATGCA ACAATTGAAG CAAAAATTCC AGGTCTAGCT 
GCTAAGAGCG GTTTTCTATT TATTAAAGCC CTCGGTCAAG TGGGTTTTTA TGTAGATGGG 
GCTGTTAATT GGGATATCGC TGCATTAGTT GGTGCCTTTG GATTAACTCT ACTTCTTTCC 
CAAGTTTTAT CTAGTCAAGG GATGCCTGCG AATCCTCAAC AATCAACAGC TAACAAGATT 
ACACCAGTTA TGATTACTGG AATGTTCCTG TTCTTCCCAT TACCTGCAGG AGTATTACTT 
TATATGGTTG TTGCCAATAT ATTTCAAGCA TTTCAGACCT TTCTTCTTAA TAAAGAAGCT 
CTTCCTGAGA ATCTACAGAA AATTCTGGAT CAACAATTAT TGGCAAAAGA TGAAGTAATA 
ACAACTTCTG CTTCAACTAT TTCAGAGAAA AGATTGCCTT TTGAACCTAA CAGTAAAAAA 
TAG 

 

Protein sequence

MIGFISEKLL IPILDFFYGL VPSYGLAIVA LTVVIRIALF PLSAGSIRSA RRMKIAQPVM 
QKKQAEIKSK FSGDPKKQQE ELGKLMNEFG SPLAGCLPLI VQMPVLFALF ATLRGSPFAD 
VPYNINLKVV PQDQIAAIDP KPYKSPRHSI FITEKSHFPV VATIPNGTKL GTEDSIKINL 
QTTNGNSYSE VLSNYENGSK FLPTWTVSKG SENLKVSQDG TVTAIKPGDA TIEAKIPGLA 
AKSGFLFIKA LGQVGFYVDG AVNWDIAALV GAFGLTLLLS QVLSSQGMPA NPQQSTANKI 
TPVMITGMFL FFPLPAGVLL YMVVANIFQA FQTFLLNKEA LPENLQKILD QQLLAKDEVI 
TTSASTISEK RLPFEPNSKK