Gene A9601_10451 details

Gene Information

• Locus tag: A9601_10451
• Symbol: carB
• ID: 4717756
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. AS9601
• Kingdom: Bacteria
• Replicon accession: NC_008816
• Strand: -
• Start bp: 906401
• End bp: 909697
• Gene Length: 3297 bp
• Protein Length: 1098 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 640078760
• Product: carbamoyl-phosphate synthase, large subunit
• Protein accession: YP_001009436
• Protein GI: 123968578
• COG category: [E] Amino acid transport and metabolism; [F] Nucleotide transport and metabolism; [I] Lipid transport and metabolism
• COG ID: [COG0439] Biotin carboxylase; [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ)
• TIGRFAM ID: [TIGR01369] carbamoyl-phosphate synthase, large subunit

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTCAAA GAGGTGATCT TAAAAAAATT CTTATTCTAG GTTCGGGCCC GATTGTTATA 
GGACAAGCAT GTGAATTTGA TTACTCTGGT ACTCAAGCTT GCAAAGCTTT AAGAAATGCT 
GGTTATGAAG TTGTCTTGAT AAATTCAAAT CCAGCATCAA TAATGACTGA TCCTGAGATA 
GCGAGCAAAA CATATATAGA ACCATTGACT CCTGAAATTG TTTCTCAAAT CATATTAAGA 
GAAAAACCTG ATGCGATTCT TCCTACTATG GGAGGTCAAA CCGCATTGAA TCTTGCGGTT 
AAATTATCAG AGTCAGATTT TTTAAAAGAA AATAATGTTG AATTAATTGG TGCTGATTTA 
AGAGCTATTA ATAAAGCTGA AGATAGAAAA TTGTTTAAAG AATCGATGGA GAAAATTAAT 
GTAAATGTTT GTCCGTCTGG GATTGCATCT AACTTGGATG AAGCTGTGGA GGTATCAAAA 
AAAATTAGTT CCTATCCTCT TATAATAAGG CCTGCATTTA CATTAGGTGG TGTAGGAGGT 
GGAATCGCTT TTAACCTTGA AGAATTTGTT GTGTTGTGTA AATCAGGTTT AGAGGAAAGT 
CCAAGTAATC AAATATTGAT TGAAAAATCA CTTATTGGAT GGAAGGAGTT TGAACTAGAG 
GTAATGAGAG ATACTGCTGA CAATGTAGTA ATAATTTGCA GTATTGAAAA TTTAGACCCA 
ATGGGAGTCC ACACTGGAGA TTCTATTACT GTCGCTCCTG CACAGACTTT AACAGATAAG 
GAGTATCAGA GATTGAGGGA TTTGTCATTA AAAATTATTC GAGAGGTAGG AGTCGAAACA 
GGAGGGAGTA ATATTCAATT TGCACTAAAT CCATCTAATG GAGAAGTAAT TGTCATTGAA 
ATGAATCCCC GTGTGAGTAG ATCCTCTGCT TTGGCAAGTA AAGCAACTGG ATTTCCCATT 
GCTAAGATTG CAGCTTTATT ATCTGTTGGC TATACACTTG ATGAGATTAT TAATGACATT 
ACAAAAAAAA CACCTGCATG TTTTGAGCCG TCAATTGATT ATGTAGTTAC TAAGATTCCA 
AGATTTGCCT TTGAAAAGTT TAAAGGCTCT ACAAATACTT TAAGCACTGC CATGAAATCC 
GTTGGTGAGT CAATGGCAAT AGGTCGTTCT TTTGAAGAAT CATTTCAGAA AGCATTAAGG 
TCATTAGAAG TCGGTGTTTT TGGATGGGAA TGTGATTCTC TAGATGAATT TAAAAATGAA 
AGTCACATTA AAAATAGTTT AAGAAACCCT ACATCTGAAA GAATTCTCAT GGTTAAGAAA 
GCTATGCAGC TTGGAAAAAC TAATTCTTAT ATTCAAGAAG TTACAAATAT AGATTTATGG 
TTTATCGAGA AATTACGTAA TATCTTTAAT TTTGAAAATG AATTTTTGAA AGAAAAGGAA 
CTTTATACTC TAGATAGGGA TTTGATGTTA CATGCTAAAC AATTAGGCTT TTCAGATCAA 
CAGATAGCAA AGTTAACTAA TTCTGATTTT TTTGAAGTGA GAAGATATAG AAAAAAACTT 
AATATAATTC CAATTTATAA GAATGTTGAT ACTTGTTCAG CAGAATTCTC GTCATCAACT 
CCCTATCATT ATTCAACTTA CGAAGAGGCA TTCATAAATT TTAATTCTCA AACTTTTGAT 
AGCGAGATTT CAGAAAATAG TAAATCAAAA AAAATTATGA TTCTAGGAGG AGGTCCAAAC 
AGAATTGGTC AGGGAATAGA ATTTGATTAC TGTTGTTGTC ATGCATCATA TCAAGCCTCC 
ACAAATGGTT ATAAAACAAT AATGGTTAAT AGTAACCCTG AAACTGTATC AACAGATTAT 
GATACTAGCG ATATTTTATA TTTTGAGCCT GTAACTTTGG AAGATGTGCT CAACATAATA 
GAGGCTGAAA ATCCTTATGG TTTAATTGTT CAATTTGGAG GCCAAACCCC ACTGAAATTA 
TCATTACCTT TATCTGAATG GCTTAAATCT AATGAAGGGC TCAGAACTGG ATCAAAAATT 
CTTGGGACTT CTCCAATATC TATCGATTTA GCAGAAGATA GAGAGGAATT TACAAAAATA 
CTTAAAGAAT TAGCTATTAG ACAACCTTTA AACGGTATTG CACATAATCA AAAAGAAGCG 
GCGGTTGTAG CAAAAAATAT AGGGTTCCCC TTGGTTGTAA GACCTTCTTA TGTTTTAGGA 
GGAAGGGCAA TGGAAATTGT TAAAGATGAG AATGAATTAT CTAGATACAT CTCTGAAGCA 
GTTAAGGTAT CTCCTGATCA TCCAATACTT CTTGATCAAT ATTTGAATAA TGCTATTGAG 
ATAGATGTTG ATGCTTTGTG CGATTCAGAG GGTTCGGTTG TTATTGCTGG TCTAATGGAA 
CATGTTGAAC CGGCAGGAAT TCATTCTGGA GACTCAGCAT GTTGTTTGCC ATCCATTTCT 
CTTTCAAAAT CCACCATAGA AAATGTAAAG AAATGGACTA AATTAATTGC ACAAAGATTA 
AATGTTGTTG GTTTAATTAA TTTGCAATTT GCAGTAACGA ATACAAATAA CAAAGAAAAA 
AAATTATTTA TTCTTGAAGC AAATCCAAGA GCATCAAGGA CAGTCCCATT TGTTTCAAAA 
GCCATAGGTA AACCAGTTGC AAAATTAGCT ACCCAGTTAA TGCAAGGTTT TACATTAGAA 
GATGTTAATT TCACACAAGA ATTTTACCCA AAATATCAGG CAGTAAAAGA AGCTGTTTTA 
CCTTTCAAAA GATTTCCTGG ATCTGATACA TTACTTGGTC CTGAAATGAA ATCTACTGGA 
GAAGTAATGG GCTTAGCTAA AGATTTTGGA ATTGCTTATG CCAAGTCGGA ATTGGCTGCA 
GGAAATGGTG TGCCTTCAGA AGGAGTGGCT TTTTTGTCTA CAAATGATTT AGATAAAAAA 
CTTCTTGAGG AAGTTGCTAG AGAATTGATG ATTTTAGGAT TTAAATTAAT CGCAACAAAA 
GGGACAGCTG CATATTTGAT TAATCTAGGC ATTCAAGTTG AAGAAGTGCT AAAAGTTCAC 
GAAGGTAGAC CAAATATTGA GGATCTAATT CGTTCTGGAC TTGTTCAATT AATAATTAAT 
ACTCCAATCG GCTCACAGGC TCTACATGAC GACGCTTATT TAAGACGTGC TGCTTTAGAA 
TATAATATTC CAACTTTTAC AACCATTCCT GGAGCAAAGG CAGCGATTAA AGCAATCAAA 
GCATTGCAAT GTAATAATAT TGATTCTTAT TCTCTTCAAG AAATCCATAA TTTTTAA 

 

Protein sequence

MPQRGDLKKI LILGSGPIVI GQACEFDYSG TQACKALRNA GYEVVLINSN PASIMTDPEI 
ASKTYIEPLT PEIVSQIILR EKPDAILPTM GGQTALNLAV KLSESDFLKE NNVELIGADL 
RAINKAEDRK LFKESMEKIN VNVCPSGIAS NLDEAVEVSK KISSYPLIIR PAFTLGGVGG 
GIAFNLEEFV VLCKSGLEES PSNQILIEKS LIGWKEFELE VMRDTADNVV IICSIENLDP 
MGVHTGDSIT VAPAQTLTDK EYQRLRDLSL KIIREVGVET GGSNIQFALN PSNGEVIVIE 
MNPRVSRSSA LASKATGFPI AKIAALLSVG YTLDEIINDI TKKTPACFEP SIDYVVTKIP 
RFAFEKFKGS TNTLSTAMKS VGESMAIGRS FEESFQKALR SLEVGVFGWE CDSLDEFKNE 
SHIKNSLRNP TSERILMVKK AMQLGKTNSY IQEVTNIDLW FIEKLRNIFN FENEFLKEKE 
LYTLDRDLML HAKQLGFSDQ QIAKLTNSDF FEVRRYRKKL NIIPIYKNVD TCSAEFSSST 
PYHYSTYEEA FINFNSQTFD SEISENSKSK KIMILGGGPN RIGQGIEFDY CCCHASYQAS 
TNGYKTIMVN SNPETVSTDY DTSDILYFEP VTLEDVLNII EAENPYGLIV QFGGQTPLKL 
SLPLSEWLKS NEGLRTGSKI LGTSPISIDL AEDREEFTKI LKELAIRQPL NGIAHNQKEA 
AVVAKNIGFP LVVRPSYVLG GRAMEIVKDE NELSRYISEA VKVSPDHPIL LDQYLNNAIE 
IDVDALCDSE GSVVIAGLME HVEPAGIHSG DSACCLPSIS LSKSTIENVK KWTKLIAQRL 
NVVGLINLQF AVTNTNNKEK KLFILEANPR ASRTVPFVSK AIGKPVAKLA TQLMQGFTLE 
DVNFTQEFYP KYQAVKEAVL PFKRFPGSDT LLGPEMKSTG EVMGLAKDFG IAYAKSELAA 
GNGVPSEGVA FLSTNDLDKK LLEEVARELM ILGFKLIATK GTAAYLINLG IQVEEVLKVH 
EGRPNIEDLI RSGLVQLIIN TPIGSQALHD DAYLRRAALE YNIPTFTTIP GAKAAIKAIK 
ALQCNNIDSY SLQEIHNF