Gene A9601_08021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_08021 
Symbol 
ID4717508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand- 
Start bp690123 
End bp690779 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content28% 
IMG OID640078516 
ProductThf1-like protein 
Protein accessionYP_001009195 
Protein GI123968337 
COG category 
COG ID 
TIGRFAM ID[TIGR03060] photosystem II biogenesis protein Psp29 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTCAAC ATACGCTAAC CTTATTAAGG TTTACATATA AAAAATTGAA AGAAAAATTG 
ACTGTTTCAG ATAGCAAAAA GTTATTTCAT GAAAAATTTC CTTACGTCAT TCCCGGTTTA 
TACAAAAGAA TAGTTGATGA AATGCTTGTC GAACTTAATC TTTTGAACCA TCAAAATGAA 
TTTACGCTGG ATTATCTCTT TTGTGTCGGC CTCACCGAAA CATTCAAAGA ATTAATGAAA 
GGATATCAAC CTGAAAAACA CTTGGATCTA CTTTTTGAAT CCTTATGCAG TTCTACAAAT 
TTTGAAGCGA AGGAAATTAA TGAAATATCT AAAAAGTCTC AAAAAGAATT AGTGGATAAA 
ACATCTAAAG ATATTTTAAA ATTATTAGTA GAGAAAAATA ATTCTAAACT TTATCCTTCA 
AGGATCTTGA ACTTAGGGAT ATATACATTA ATTTCAAACT CCCAAGATTT CAAAGAGAAA 
AATGAATCAG ATAAAAATAA GATGACCTCT GATATTTTTG AGAAGTTAAG CTTATCTGCT 
AATAAAGCAG AAAAAGATAT TGGAATCTAC AAAAGCAGCA TATCAAAAAT GGAACAAGCA 
AAAGAATTAA TTGAAGAGCT CAGAATTAAG GACAAGAATA AAAACCAAAA AAAATAA
 
Protein sequence
MSQHTLTLLR FTYKKLKEKL TVSDSKKLFH EKFPYVIPGL YKRIVDEMLV ELNLLNHQNE 
FTLDYLFCVG LTETFKELMK GYQPEKHLDL LFESLCSSTN FEAKEINEIS KKSQKELVDK 
TSKDILKLLV EKNNSKLYPS RILNLGIYTL ISNSQDFKEK NESDKNKMTS DIFEKLSLSA 
NKAEKDIGIY KSSISKMEQA KELIEELRIK DKNKNQKK