Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_06921 |
Symbol | pncA |
ID | 4717395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | - |
Start bp | 614985 |
End bp | 615551 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 640078405 |
Product | isochorismatase hydrolase family protein |
Protein accession | YP_001009085 |
Protein GI | 123968227 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.467338 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGGGC ATGAAAAATC TTCTGACAAA CTATCACCAA AAGTGAATGC TTTACTAATC ATAGATGTTC AGGAAAAAAT TATAAGAGCA ATATTTAACA AAGATTCAAT AACCAAAAAC ATCAAAAAGC TAATAGATGC CTACCAAATT TTAGAAGAAA ACATTTTTTT ATCTGAACAG AACCCATTCA AATTGGGTGC AACGGTACCT GAATTGTTGC CCAAAAATGG ATTTAAAAAA ATTGAGAAAA TGGATTTTAG CTTAGCTAAC ATACAAGAAT TTTTAGAAGA ACTTAAAAAT AAGAAAATTA CAAATTTGAT AGTTTGTGGT ATCGAAACGC ATATTTGTAT TCAACAAACA GCCTTAGATT GTTTAGAAAA AGGATTTGAA GTTATTCTCG TATCAGATGC TATGAGCAGT CGAAATAGGG TAGATCATGA AATAGCATTG CAGAGAATGA TTCAGAAGGG AGCGATCTTA ACAACTACTG AATCAATAAT TTTTGAATTA TGCAAAACTG CGGATAGAAA AGAATTTAAA GAAATTAGAA ATATAATAAT TAGATAA
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Protein sequence | MKGHEKSSDK LSPKVNALLI IDVQEKIIRA IFNKDSITKN IKKLIDAYQI LEENIFLSEQ NPFKLGATVP ELLPKNGFKK IEKMDFSLAN IQEFLEELKN KKITNLIVCG IETHICIQQT ALDCLEKGFE VILVSDAMSS RNRVDHEIAL QRMIQKGAIL TTTESIIFEL CKTADRKEFK EIRNIIIR
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