Gene A9601_06921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_06921 
SymbolpncA 
ID4717395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand
Start bp614985 
End bp615551 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content29% 
IMG OID640078405 
Productisochorismatase hydrolase family protein 
Protein accessionYP_001009085 
Protein GI123968227 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.467338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGGGC ATGAAAAATC TTCTGACAAA CTATCACCAA AAGTGAATGC TTTACTAATC 
ATAGATGTTC AGGAAAAAAT TATAAGAGCA ATATTTAACA AAGATTCAAT AACCAAAAAC
ATCAAAAAGC TAATAGATGC CTACCAAATT TTAGAAGAAA ACATTTTTTT ATCTGAACAG
AACCCATTCA AATTGGGTGC AACGGTACCT GAATTGTTGC CCAAAAATGG ATTTAAAAAA
ATTGAGAAAA TGGATTTTAG CTTAGCTAAC ATACAAGAAT TTTTAGAAGA ACTTAAAAAT
AAGAAAATTA CAAATTTGAT AGTTTGTGGT ATCGAAACGC ATATTTGTAT TCAACAAACA
GCCTTAGATT GTTTAGAAAA AGGATTTGAA GTTATTCTCG TATCAGATGC TATGAGCAGT
CGAAATAGGG TAGATCATGA AATAGCATTG CAGAGAATGA TTCAGAAGGG AGCGATCTTA
ACAACTACTG AATCAATAAT TTTTGAATTA TGCAAAACTG CGGATAGAAA AGAATTTAAA
GAAATTAGAA ATATAATAAT TAGATAA
 
Protein sequence
MKGHEKSSDK LSPKVNALLI IDVQEKIIRA IFNKDSITKN IKKLIDAYQI LEENIFLSEQ 
NPFKLGATVP ELLPKNGFKK IEKMDFSLAN IQEFLEELKN KKITNLIVCG IETHICIQQT
ALDCLEKGFE VILVSDAMSS RNRVDHEIAL QRMIQKGAIL TTTESIIFEL CKTADRKEFK
EIRNIIIR