| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_06741 |
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| Symbol | sds |
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| ID | 4717376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. AS9601 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008816 |
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| Strand | + |
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| Start bp | 598573 |
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| End bp | 599544 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640078387 |
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| Product | polyprenyl synthetase; solanesyl diphosphate synthase (sds) |
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| Protein accession | YP_001009067 |
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| Protein GI | 123968209 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR02749] solanesyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.290207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATACAG TAACAGAACT ACTACAACCA GTTGAAAATG ATCTTGATGA TCTTATTCTT
GAACTGAAAA ATTTAATTGG AGCTGGTCAT CCAATTCTTC AAGCAGCAGC TGAACATCTT
TTTAGTGCTG GGGGTAAAAG ACTTAGACCC GGTATCGTCT TATTAATTTC AAAAGCTATA
TCTCCTGAAT TTTGCTTGAC AACGAAACAT AAAAGACTTG CAGAAATAAC TGAGATGATT
CATACAGCCT CTTTAGTCCA TGATGATGTT GTTGATGAGG CATCTACAAG AAGAGGAGTT
GATACAGTTC ATAGCAGATT TAATACAAGA GTAGCTGTTT TGGCGGGTGA CTTTTTATTC
GCTCAAGCAA GTTGGCACCT AGCAAATCTT GACAATGTAA ATGTAGTTAA ATTACTTAGT
AGAGTAATAA TGGATTTAGC AGAGGGTGAA ATCAAACAAA ATTTAAATAG ATTTGATTCG
GCTCAATCTT TTTCCAAATA CATAAACAAA AGTTATTGTA AAACAGCATC ATTAATAGCC
AATAGTTGCA AAGCAGCTGG AGTTTTGAGT GGGATTAATG ACGAAAACTT AACTTCGCTG
TACGATTTTG GCAAAAATAT TGGTTTAGCA TTCCAGGTTG TAGATGATAT TCTTGATTTT
ACTGGAAATG ATAAACAACT TGGAAAACCT GCTGTAAGTG ATCTAGCTAG TGGTTATCTC
ACCGCCCCAG TTTTATATGC TTTAGAAGAA AATAAACAAT TGTCAGTTCT TATAAACAGA
GAACTTGCAG AAAAAGATGA TTTAGATGAT GCACTAAGTA TCATCATGAA CTCTAAAGCT
ATTGAAAGTT CTAGGAAACT AGCTGAGGAT TTTGCAATAC TTTCTAAAGA AGCTATAGTC
TGGCTTCCTG ATTCAGAATA TAAAAGAGCT TTAATGGCTC TTCCAGAATT TGTTCTAAGC
CGTATTTATT AG
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| Protein sequence | MNTVTELLQP VENDLDDLIL ELKNLIGAGH PILQAAAEHL FSAGGKRLRP GIVLLISKAI
SPEFCLTTKH KRLAEITEMI HTASLVHDDV VDEASTRRGV DTVHSRFNTR VAVLAGDFLF
AQASWHLANL DNVNVVKLLS RVIMDLAEGE IKQNLNRFDS AQSFSKYINK SYCKTASLIA
NSCKAAGVLS GINDENLTSL YDFGKNIGLA FQVVDDILDF TGNDKQLGKP AVSDLASGYL
TAPVLYALEE NKQLSVLINR ELAEKDDLDD ALSIIMNSKA IESSRKLAED FAILSKEAIV
WLPDSEYKRA LMALPEFVLS RIY
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