Gene A9601_04161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_04161 
Symbol 
ID4717112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand
Start bp360061 
End bp360825 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content34% 
IMG OID640078126 
Productputative dehydrogenase 
Protein accessionYP_001008811 
Protein GI123967953 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTAC AAATAGAAAA ACAGACCGTT TTAGTAACAG GTGCAGGGAG AGGATTAGGT 
TCCGAAATCG CAAGATCATT TCATAGAGAG GGTGCAAAAG TAATTATCAA CTATAGAAAT
TCATATGAAA GTGCAAAAAA TTTATCTGAT TCTTTAGGAG AGAATGCAAT TTTAGTAAAA
GGGGATATCA GAGAAAAAGA TCAAGTCTCT AAAATGCACG AAGAATTGGC AAGTCAAAAT
ATCAGAGTGG ATACGATAAT CCACAACGCA ATAAATGACT TTATTTTCAA TGGTGATCAA
AGAAAAAAAA TAGACACTAT AGAGTGGCAA GATTTCCAAA ATCAGATTGA AACTACTCAA
AAAGGATTTC TAAATCTGCT GAATATTTTT ACACCAAAGA TGAAAAATAA TTCTTTTGGA
AGAGTTATAT CTATTGGAAC TAATTTATTT CAAAATCCAG TAATTCCTTA CCATGATTAC
ACTGCAGCCA AAGGCGGATT ATTATCACTT ACAAGAACTG CAGCAATAGA TCTAGGGCAA
TTTAATATCA CAGTAAATAT GGTTTCAGGA GGCTTATTAA AGGTAACTGA TGCTAGCAAA
GGCACTCCAG ATAGTGTTTT TGAATATATT TCCAGCATTA CACCCTTAAG AAAAGTTACC
ACTACAGAGG ACTTTTCGGA TGCTGTATTA TTTTTTGCTT CCCCTTGGTC GAGGGCAGTC
ACTGGTCAAA ATTTAGTAGT TGATGGTGGC TTAGTTCTAA ACTAA
 
Protein sequence
MNLQIEKQTV LVTGAGRGLG SEIARSFHRE GAKVIINYRN SYESAKNLSD SLGENAILVK 
GDIREKDQVS KMHEELASQN IRVDTIIHNA INDFIFNGDQ RKKIDTIEWQ DFQNQIETTQ
KGFLNLLNIF TPKMKNNSFG RVISIGTNLF QNPVIPYHDY TAAKGGLLSL TRTAAIDLGQ
FNITVNMVSG GLLKVTDASK GTPDSVFEYI SSITPLRKVT TTEDFSDAVL FFASPWSRAV
TGQNLVVDGG LVLN