Gene A9601_03501 details

Gene Information

• Locus tag: A9601_03501
• Symbol: petD
• ID: 4717039
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. AS9601
• Kingdom: Bacteria
• Replicon accession: NC_008816
• Strand: +
• Start bp: 320471
• End bp: 320953
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 640078054
• Product: cytochrome b6-f complex subunit IV
• Protein accession: YP_001008745
• Protein GI: 123967887
• COG category: [C] Energy production and conversion
• COG ID: [COG1290] Cytochrome b subunit of the bc complex
• TIGRFAM ID: [TIGR01156] cytochrome b6/f complex subunit IV

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.114467
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTACTT TAAAAAAACC AGATCTATCT GATCCAAAAT TGAGAGCAAA GTTAGCTAAA 
GGTATGGGCC ATAATTATTA TGGTGAACCA GCTTGGCCAA ATGATTTACT ATATATATTC 
CCGGTAGTCA TCTTGGGAAC TATTGCCTGT GTAGTTGGAT TAGCAGTTCT TGATCCTGCA 
ATGTTAGGAG ACAAAGCTAA TCCCTTCGCA ACACCCCTTG AAATACTTCC TGAATGGTAC 
CTTTACCCAG TTTTTCAAAT ACTTAGAGTT GTTCCTAATA AACTTTTGGG TATTGCACTT 
CAAACATTAA TCCCACTTGG ATTAATGATT TTACCTTTTA TCGAAAACGT TAATAAATTT 
TCTAATCCAT TTAGAAGACC AATAGCAATG TCTGTTTTCT TATTCGGAAC TTTTCTAACA 
ATATACCTTG GTATTGGGGC ATGCTTGCCA ATTGATAAAT CACTAACCTT AGGACTATTT 
TAA 

 

Protein sequence

MSTLKKPDLS DPKLRAKLAK GMGHNYYGEP AWPNDLLYIF PVVILGTIAC VVGLAVLDPA 
MLGDKANPFA TPLEILPEWY LYPVFQILRV VPNKLLGIAL QTLIPLGLMI LPFIENVNKF 
SNPFRRPIAM SVFLFGTFLT IYLGIGACLP IDKSLTLGLF