Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_4378 |
Symbol | |
ID | 7299541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 4871480 |
End bp | 4873363 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643597184 |
Product | signal transduction histidine kinase, nitrogen specific, NtrB |
Protein accession | YP_002494761 |
Protein GI | 220919457 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.055155 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCCTCG ACGTGTTCCG GCGGTTCCTG GAAGGCGAGG GGCGCACCCT GCTCCTCGCC GGCTCGGCGC GCGAGGCGCT GGCGCGCGCG GCGGAGCCCG GCGACATCGA CGTGGCGCTG GTGGACAAGA ACCTGGGCGA CGGCTCGGGG CTCGACGTGG CCCGCCAGCT CAAGGCGGCC AAGCCCGACG TCGAGGTGAT CCTGGTCACC GGCTACGCCT CCCTCGACTC CGCCATCCAG GCGGTGCAGA TCGGCGCGTT CGACTACGTG ACGAAGCCGG TCTCCGATTA CGACGCGCTC AACCTCAAGG TCGAGAACGC GGTCGAGAAG GTGCGGATGA AGCGCTCGCA GCGCGAGCTG GTGGCGCGCC TGGTGGAGAG CGAGGCGCTG CACCGCGGCG TGTTCGAGAC CTCCTCCGAC GCCATCCTGC TGGTGGACGC GGAGTCGGGC CGGCTGGAGG ACGCGAACCC GGCCGCCGAG CGGCTCTACG GCCGCGATCG CGACGCGCTC CGCGACCTGC GCTACGCCGA CCTGCTCGAG GAGGGCGGCG GCGAGGGCGG CCCGGCGGCG GGGATCCACG CCGCCCCGGG GCGGCACCGG CGCGCCGATG GGACGGCCTT CCCGGTCGAG GTGACGGTGG ACGCGCTGCG CCTGCACGAC CGCGGGCTGC GCGTGGTGTC GGTGCGCGAC ATGTCGGAGC GGGAGCGCGC CGAGGCGGAG CGCCGCGAGC TGGAGCAGAA CCTCCGCCAG GCGCAGAAGA TGGAGGCGGT GGGCCGGCTC GCCGGCGGCG TCGCCCACGA CTTCTCCAAC GTGCTCGCGG TGGTGCTCGG CTACTCCGAG CTGCTGGTGC GGGACCTGCC GACCACCGAT CCGCGCCTGC GCGAGTGCGC CGACGGGATC ATCGAGGCGG CGCACCGCGC GGTGGGCGTC ACCCGGCAGC TCCTCACGCT CTCCCGCAAG AAGCTGCTCC GGCCGGAGGT GCTGTCGCTC AACAAGGTGG TGCAGGACCT CGGCAAGCTC CTCGGGCGCG CCATCGGCGA GCGGATCGAG GTCACCACCA CGCTCCAGGA GCAGCCGTGG CCGGTGCTCG CCGACGCCGA CCAGCTCGCG CAGGTGCTGC TCAACCTGGC GGTGAACGCG CGCGACGCGA TGCCCGACGG CGGGCCGCTG CACATCGCCA CCGCGAACGT GGAGGTGCCG CAGGCGCTGC GCGAGCTCTC GCTGCCCGCC GGGCGCTACG TGACGCTCAC GGTGCGCGAC TCCGGCATGG GCATGACGGA GGAGGTGCGG GCGCGCATCT TCGAGCCGTT CTTCACCACC AAGGAGACCG GCACCGGGCT CGGGCTCGCC ACGGTCTACG GCATCGTGCG GCAGGCCGGC GGCGCCATCC GGGTGGAGTC GCGCCCGGGC GCGGGCACGT CCTTCACCGT GTACCTGCCG GCCGCCGACG AGGCGGCGGC GCGGGTGGCG GTCGCGGTGC CGGTGGCGGC GCCGCGCGGG CTGGGCGAGA CGGTGGTGCT GGCCGAGGAC GAGGACGCGC TCCGGACGCT GCTCGGCCGC GTGCTCTCCG GCAGCGGCTA CCAGGTCATC TCCGGGCGGA ACGGCGCCGA GGCGCTGGAG GCGGCGCGCG CCCGCGGCGG CCGGGTGGAC GTGCTGCTCA CCGACCTCGT CATGCCGCGC ATGACCGGCG CGGAGCTGGC CGAGGCGCTC ACGCCGGGGC AGCCCGGGAT GAAGGTGCTG TTCATGACCG GCCACACCGA CGACGTGCTG GTGCAGGACC GGCTGGTGGA CGGCGACGTG GAGCTCATCC AGAAGCCGTT CACCAGCGAG GCGCTGCTCG CGCACCTGCG CCGGCTGCTC GGGCCGCCGC GCGTGGCGGC GTGA
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Protein sequence | MILDVFRRFL EGEGRTLLLA GSAREALARA AEPGDIDVAL VDKNLGDGSG LDVARQLKAA KPDVEVILVT GYASLDSAIQ AVQIGAFDYV TKPVSDYDAL NLKVENAVEK VRMKRSQREL VARLVESEAL HRGVFETSSD AILLVDAESG RLEDANPAAE RLYGRDRDAL RDLRYADLLE EGGGEGGPAA GIHAAPGRHR RADGTAFPVE VTVDALRLHD RGLRVVSVRD MSERERAEAE RRELEQNLRQ AQKMEAVGRL AGGVAHDFSN VLAVVLGYSE LLVRDLPTTD PRLRECADGI IEAAHRAVGV TRQLLTLSRK KLLRPEVLSL NKVVQDLGKL LGRAIGERIE VTTTLQEQPW PVLADADQLA QVLLNLAVNA RDAMPDGGPL HIATANVEVP QALRELSLPA GRYVTLTVRD SGMGMTEEVR ARIFEPFFTT KETGTGLGLA TVYGIVRQAG GAIRVESRPG AGTSFTVYLP AADEAAARVA VAVPVAAPRG LGETVVLAED EDALRTLLGR VLSGSGYQVI SGRNGAEALE AARARGGRVD VLLTDLVMPR MTGAELAEAL TPGQPGMKVL FMTGHTDDVL VQDRLVDGDV ELIQKPFTSE ALLAHLRRLL GPPRVAA
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