| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_4345 |
|---|
| Symbol | |
|---|
| ID | 7299508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 4833985 |
|---|
| End bp | 4835145 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 80% |
|---|
| IMG OID | 643597151 |
|---|
| Product | MJ0042 family finger-like protein |
|---|
| Protein accession | YP_002494728 |
|---|
| Protein GI | 220919424 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0457] FOG: TPR repeat |
|---|
| TIGRFAM ID | [TIGR02098] MJ0042 family finger-like domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.861671 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCC GCTGCGAGCG CTGCAGGGCG GCCTACGTGC TCGAGGACGA GCAGGTGACG
GCCGCCGGCG TGGCCCTTCA GTGCACCAAC TGCGGGTACC TCTTCGAGGT GAGACGGAAG
GTGGTGTTCG TCACCACCCC GCTCCGCCCG GAGCACGCGC TCGGCGCGAG GCCGCTCGCG
CCGCCGCCCC GGGCCGGACC TCCCGCCGCC CCCGCCCCGC CGGCGCCCCC GGCCGCGCCC
GCGACACCCG GCGCGCGCGC CGCCTCGCCC GCGGCGGCCC CTCCTGCGCC GCCGGACGTC
CCGCGCCCGG TCGTCCCGCC CACCGCGGCC CGCATCGAGC CGCCCGCCGC GTTCGGCGCC
GGCACGTTCG ATCCGGGGAG CCCGCCCTCC ACCAGCCTGC GGCGGAGCCG GGCGCCGCAG
CTGATCCTGG CGCTGGTGCT CGCCGGCGGG CTCGGGCTCG GGGCGAAGGT GCTCCTCGAC
CGGATGCGCG CCCAGGTGGA CCTGTTCGGC GGCGACGCCG CCTCGCCGCC GACGGAGGCC
GAGCCGGCCG CGCCCGGACC GCAGCCCGGC GCAGAGCCGG CCCCGCCGTC CGCGGTCGCG
CCCGAGGCCG CGCCCACCTC GCCGTCGCCC GCGGCCGGAT CCCCCGGCGA GCCCTCGCCC
ACCGGCGCCA TCGCCCCGGG CGCACCGCCG CCCACCGGCG CTCCCGCGCC CGCGCCGGCG
GAGGCGCCCG GCGCCGCGCC CTCGCCGGAC GCCGCGCCGC CCGCGGCCGC GCCGGAGCAG
GCGGGCGCCG CCGCGAGGCC GCCCGCGGGC GCCGACGCGC TCGCGCAGGC CGGCCGCCTG
CGGAGCCGCG GCCAGATCGC GCGGGCGCTC GAGCTCTACC GCGGCGTGCT CGCCGCGGAT
CCCGACAACG TGGCGGCCCT GACCGGGCAG GGTTTGTGCT ATCTCGATCT CGCCCGCTAC
CCTTCCGCCG AGGCGGCCTT CCAGGCGGCG CTGCGGGTGG AGCCGGAGAA TCCGGACGCC
ACCCTCGGGC TCGCCGAGAC ATACCGGTGG CAGGGGAACG ACGCGGAAGC CATCAGGTAC
TACGAGCGGT ACCTCGCGCA TCATCCCGAC GGCGAGGAGG CCGCGGTCGC CCGGAACGCC
ATCGACGCAC TGAGGAGATG A
|
|---|
| Protein sequence | MDIRCERCRA AYVLEDEQVT AAGVALQCTN CGYLFEVRRK VVFVTTPLRP EHALGARPLA
PPPRAGPPAA PAPPAPPAAP ATPGARAASP AAAPPAPPDV PRPVVPPTAA RIEPPAAFGA
GTFDPGSPPS TSLRRSRAPQ LILALVLAGG LGLGAKVLLD RMRAQVDLFG GDAASPPTEA
EPAAPGPQPG AEPAPPSAVA PEAAPTSPSP AAGSPGEPSP TGAIAPGAPP PTGAPAPAPA
EAPGAAPSPD AAPPAAAPEQ AGAAARPPAG ADALAQAGRL RSRGQIARAL ELYRGVLAAD
PDNVAALTGQ GLCYLDLARY PSAEAAFQAA LRVEPENPDA TLGLAETYRW QGNDAEAIRY
YERYLAHHPD GEEAAVARNA IDALRR
|
|---|
| |