| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_4062 |
|---|
| Symbol | |
|---|
| ID | 7297487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 4537767 |
|---|
| End bp | 4540208 |
|---|
| Gene Length | 2442 bp |
|---|
| Protein Length | 813 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643596869 |
|---|
| Product | RND superfamily transporter, putative |
|---|
| Protein accession | YP_002494446 |
|---|
| Protein GI | 220919142 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1033] Predicted exporters of the RND superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGGCGGG CGAGCGCGCG CGCGCCGGGG CACGAGCGCC CCGACGCAGC CGGTCCTGCG
ACGGGGAACG CGTCCTCGCG CGGCGCGCCC GGGCCGTTCG ATCCCGCCGA GGGGAGCTGG
CTGGAGCGGC TGGTGTTCGG GCACCGCGCC GCGGTGGTGA TCCTGACCGC GCTCGTGACG
CTCGCGCTCG GGGCCGCGGC CGCCACCCGC CACGTGGTGA GCGCCGACCT GGACCGGATC
ACGCCCGGCT CCCACCCGTT CGTGCAGGCC GCCCGCGCCC GCGCCGACCG GCTGCGCGGC
CTCGGCAACA CCCTCCTCGT GGTGGTCGAG AACCCGCGCG GCGACGTCTG GGATCGCGCC
TACCTGGAGG CGCTCCGCGA CGCGAGCGAC ACGCTGTTCC TCATGCCCGG CGTGGATCGC
CCCTGGGTGA AGTCGCTCTG GACGCCGTCG GTCCGCTGGA CCGAGGTGAC CGAGGAGGGC
TTCCGGGGTG GCCCGGTGAT GCCGGACGCG GCCGACGGCT CGCCGGAGGC CATCGCGGCG
CTGCGCCGGA ACGTGCGGCG GGCCGGGCTG ACGGGGACGC TGGTCGCGCT CGACGAGCGA
TCCAGCGCGG TGCAGGTGCC GCTGCTGGAT CGCGATCCGG TCACCGGCGC CGGCCTCGAC
TACCGTGCGC TCTCGGCGGA GCTGGAGGCG CTGCGGCGGC GCCTCGAGGG GCCGGCCGGC
GACGGGCCGG TGCGCGTGCG CATCGTCGGC TTCGCGAAGC GGGTGGGCGC GATCCTCGAC
GGCACCGTGG CGGTGGGCGC CTGGTTCGGC GTGGCCGCCG CCATCGCGGC CGCCATCCTG
TGGCTCTCCT CGCGCTGCCT CCGGAGCACG GCGCTGGTGC TCGCCTGCTC GGGCGTGGCG
CTGGTGTGGC AGCTCGGCAT CGTCTCGCTG CTGGGCGTGC CGCTCGATCC GTTCTCGGTG
CTGGTGCCGT TCCTGATCTT CGCCATGGGG GTGTCCCACG GCACGCAGAA GATGAACGGC
GTGCTGCAGG ACGTGGGGCG CGGCGCCGAC CGGCGGCTCG CGGCTCGCCG CACCTTCCGC
CGGCTCTTCC CGGCCGGGCT CACCGCGCTC CTCACCGACG CGGTCGGGTT CTCGGTGCTC
GCGCTGGTGG ACGTCCCGGC CATCCGGCAG CTCTCCCTCG CCGCCACGGT GGGCGTGGGC
GTGCTCATCG TCACGAACCT GGTGCTGCTG CCGGTGCTGC TCTCGTACAC CGGGGTGAGC
GGCGCGGCGG CGCTGCGGAG CCTCCGCGGC GAGGCCGGCG GCGCGGGGCC CTGGGGCGCC
TGGCGGCTGG TGGACCGCTT CACCGAGCCG CGCTGGGCGG CGGGGATCCT GGCCGTGGCC
GCGGTGCTCG TCGGGATCGG GCTCGCCGCC GGGCGCGGGG TGCCGGTCGG CTCGACCCAG
CCCGGCGCGC CGGAGCTGCG CGCCGACGCC CGCTACAACC AGGACGACGC CTACCTCGCG
GCCCACTACG GCGCGTCGAG CGACGTGTTC GCGGTGATGG TGGAGACGCC GCCCGAGGGC
TGCACCTCCT GGGAGACGCT CGTCGAGGCC GACCGGCTGG GCTGGGCGCT GCGGCAGGTC
CCGGGCGTGC AGGCCACCGC CTCGCTCGCC GACGCGGTCC GGCAGATCAC GGCGGGCTCG
TTCGAGGGCT GCCCGAAGTG GCTGACGCTC TCGCGCGACC CGCGGATCCT GGGGGGCGCG
GCCGAGGCGG CTGGGACGCG CAACCCCGAC CTGTTCGACC CGGAGTGCAC GGTCATGCCG
GTGCTCGCGT ACCTCTCCGA CCACCGCGCC GACACGCTCG ACCGCGTGGT GGCCGCCGCC
GAGGCGTTCG CGCGCGACCA CGCCTCGCCG GGCCGCGCCT TCCTGCTCGC AGCGGGGAGC
GCGGGCGTGG AGGCCGCCAC CAACCTCGCC GTCCGCGAGG CGCAGCCGCG CATGACCGCC
TGCGTGTTCG CGGCGGTGGT GGCGCTCTGC CTGCTGGTCT TCCGGAGCTG GCGGGCGGTG
GTGGTGACGG TGGTGCCGCT CGCCACCACC GCGGTGCTGT GCCGGGCGGT GATGGCGTGG
CTGGGCATCG GCATGACCCT CGCCACGCTG CCGGTCATCG CGCTCGGCGT GGGCATCCCG
GACTTCGCGC TCTACCTGCT CTCGGTCCAG CTCGCGCACC AGCGCGCGGG CGCGCCGCTC
GGCGAGGCGC ACCGGCGCGC GCTCCGCTTC ACCGGGCGGC CGGTGGTGCT GGTGGCCGTG
ACGCTCGCGG CGGGCGTCGT CACCTGGGCG TTCTCGCCGC TCCGCCTCCA GGCCGACATG
GGCATCCTGC TCACCTTCAT GTTCCTCGGG AACATGGTCG CCGCGGTGGC GCTCGTGCCG
GCGCTCTCCC GGCTCCTCCT CCGGGAGGTC CCCGCCCGAT GA
|
|---|
| Protein sequence | MRRASARAPG HERPDAAGPA TGNASSRGAP GPFDPAEGSW LERLVFGHRA AVVILTALVT
LALGAAAATR HVVSADLDRI TPGSHPFVQA ARARADRLRG LGNTLLVVVE NPRGDVWDRA
YLEALRDASD TLFLMPGVDR PWVKSLWTPS VRWTEVTEEG FRGGPVMPDA ADGSPEAIAA
LRRNVRRAGL TGTLVALDER SSAVQVPLLD RDPVTGAGLD YRALSAELEA LRRRLEGPAG
DGPVRVRIVG FAKRVGAILD GTVAVGAWFG VAAAIAAAIL WLSSRCLRST ALVLACSGVA
LVWQLGIVSL LGVPLDPFSV LVPFLIFAMG VSHGTQKMNG VLQDVGRGAD RRLAARRTFR
RLFPAGLTAL LTDAVGFSVL ALVDVPAIRQ LSLAATVGVG VLIVTNLVLL PVLLSYTGVS
GAAALRSLRG EAGGAGPWGA WRLVDRFTEP RWAAGILAVA AVLVGIGLAA GRGVPVGSTQ
PGAPELRADA RYNQDDAYLA AHYGASSDVF AVMVETPPEG CTSWETLVEA DRLGWALRQV
PGVQATASLA DAVRQITAGS FEGCPKWLTL SRDPRILGGA AEAAGTRNPD LFDPECTVMP
VLAYLSDHRA DTLDRVVAAA EAFARDHASP GRAFLLAAGS AGVEAATNLA VREAQPRMTA
CVFAAVVALC LLVFRSWRAV VVTVVPLATT AVLCRAVMAW LGIGMTLATL PVIALGVGIP
DFALYLLSVQ LAHQRAGAPL GEAHRRALRF TGRPVVLVAV TLAAGVVTWA FSPLRLQADM
GILLTFMFLG NMVAAVALVP ALSRLLLREV PAR
|
|---|
| |