Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_3931 |
Symbol | |
ID | 7297271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 4371611 |
End bp | 4372900 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 643596740 |
Product | protein of unknown function DUF214 |
Protein accession | YP_002494320 |
Protein GI | 220919016 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.597389 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGCGCGC GTGGCGTCCT CTGGATCGCG CGGGCGAACC TGCGCGCCGA CCGCAAGGGC GCGCTGCTGA ACGCGGCCGC CGCCTGCGTG GGCGCGGCGG CGCTGGTGTT CATCCTGGCG CTCGGCATGG GCGTCTCGCA CGCGGCCCGG CGCATGTTCC CGGCGGACGC GCGGCTGGTG GAGGTGGTCC CGGCCGGCGT GGCGCTGGGC GGGGTCCTGG GCGGCGGGCG CCTCGACGAC GCGGCGCTGG CGCGGCTCGG GCGCCTCCCC GGCGTCGAGC AGGCCTGGCC GCGGCTCTCG CTGCGCGTGC CGGTGGCGGC GTCCCGGCCG CCCACCGGGC TCGACTACAA CTGGCCGCCC GGCATGACCC TCCAGATCCC GGTGGTGGGC GTGGCGCCCG GGCTGGTGCA GGCCGACCTG CGGGCGGGGC GCGCCTTCGC GGACCCGGGC CCGGGCGGCG GCCCGATCCC GGTGCTGCTC TCGCGGCGGC TGCTCGAGGT CTACGACAAG ACCATCGCGC CGGCCTGGAA CGTGCGGAGG CTGCCGCCGG GCCTGTCCAT CGTGGGGCTC CAGCTCCCGG TGCGGGTCGG CTTCTCGATC GTGCCGCAGA AGACCGAGGA CCGGGTGTAC GAGGCGCGCC TGGAGCTGGC CGGGCTCTCG GATCGCGTGC CGCTCTACCT GATGGCGATG CCGCTCGACA CCGTGCGGCG CCTGCACCGC GAGTACGGCA AGCCGGACGC GGGCTACACG CAGGTGACGC TGCTCGCGCG CCGCCCCGAC GACGTGCCGG CGGTCATGGC GGCGGTGCGG CGCATGGGCT TCTCGGTGGA CGAGGGGGAG CGCTCGGCGG CGGAGCGCGT GGGCACGGTG GTGGCGGTGA CCACCGGCGC GCTCGCGCTG CTCGCCGGCG TCCTGTGCGC GCTCGCGGCG CTCGCCATCG CGCAGTCGCT CTCGGCGAGC GTGCGCGGCC GGGCGAAGGA GATCGCGATC CTGGAGGCGG TGGGCGCGGC GCCCGCCGAC GTGCGCGCGG TGGTGCTCGC GGAGGCGGCG CTGGTGGGGC TGGTGGGCGG CGCGATCGGC ACCGCGCTGG CGGTGGCCGC GGCGCGGGTC ACCGACGCGG CCGCGGCCCG CGCGCTCCCG GACTTCCCGT TCCGCCCGGA CACCTTCTTC GCGCTGCCGC CCTGGCTCGT CGTGCTCGGC GTCGCGGTGC CGGCGGCGGC GGCGGTGGTG GGCGCGCTCG CGCCGGCGGC GTTCGCGGCG CGGATCGATC CGGCGAGAAC GTTGTCGTGA
|
Protein sequence | MSARGVLWIA RANLRADRKG ALLNAAAACV GAAALVFILA LGMGVSHAAR RMFPADARLV EVVPAGVALG GVLGGGRLDD AALARLGRLP GVEQAWPRLS LRVPVAASRP PTGLDYNWPP GMTLQIPVVG VAPGLVQADL RAGRAFADPG PGGGPIPVLL SRRLLEVYDK TIAPAWNVRR LPPGLSIVGL QLPVRVGFSI VPQKTEDRVY EARLELAGLS DRVPLYLMAM PLDTVRRLHR EYGKPDAGYT QVTLLARRPD DVPAVMAAVR RMGFSVDEGE RSAAERVGTV VAVTTGALAL LAGVLCALAA LAIAQSLSAS VRGRAKEIAI LEAVGAAPAD VRAVVLAEAA LVGLVGGAIG TALAVAAARV TDAAAARALP DFPFRPDTFF ALPPWLVVLG VAVPAAAAVV GALAPAAFAA RIDPARTLS
|
| |