Gene A2cp1_3544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_3544 
Symbol 
ID7299594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp3962862 
End bp3964100 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content72% 
IMG OID643596357 
Productprotein of unknown function UPF0118 
Protein accessionYP_002493940 
Protein GI220918636 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACCG ACCTGCCCCT CTGGAGGCGA CCGCGCACCC GCCTCTACGC GCTCACCGCG 
CTGCTGTGGG TGATGATGCT GGGGGTGGTG GCGCTGGCGT GGCCGGTGCT GCTCCCGTTC
ACGCTGGCCG GGCTCGCCGC CTACGTCATC GACCCGGTCA TCGCCGGGAT CGCGCGCCAG
CGCGTGGCCG GGCGGCCGGT CCCGCGCGTG GCGGCGGTGC TGGTCGTGTA CGCGGTGCTG
GGCACGCTCG TCTGGATCGC CGCGGTCTCG ATCCTCCCGG CGGTCTACCG CGAGGCGATC
CGCGCCCTGC TCGAGCTCCG GGACTTCCTC GCCTCGATCA CGCCGGAGCG GGTGCAGGAG
TGGACGCGCG CCATCGACGC GTTCCTGCAG CGCTACGGGA TCCCGCTCGA CGTCACGCCC
TCGACCGGCG GGCTCGACAC GCCCGGCGGG CGGTTCTCGG TCGACCTCGC CGCGGGGATG
GCGAGCGCGC TGCACGACCT GACGCTCGCG CTGCGGGGCC GCGTCAGCGA CGTGGTGGCG
TTCTCGCGCG CCATCCTGGC CGGCACGATC CAGACGCTGT TCTTCGTGGT GCTGCTGTTC
ATGCTGACCG CGTTCATCTC GATGGACGCA CCCCGCATCC TGCGCTGGTT CGAGACGGTG
GTCCCCTCGC ACTGGCGCGC CGACCTGCGC CGGCTCCGCG CCGGGATCGA CGCCGGGCTG
TCCGGCGTGG TGCGCGGGCA GCTCACCATC ATGGTGGTGA ACGGCATCCT CACGCTCATC
GGCCTGCTGG TGCTGAAGGT GCCGTTCGCC TTCGCGCTCG GCTTCCTCGC CTTCGTCCTC
TACATCGTGC CCATCTTCGG CACGATCCTC TCCTCCGTCC CCATCGTGCT CCTGGCGCTC
ACCGGCGGCG GGCCGACCAA GGCGCTGCTC GCGCTCGGCT GGATCACGGT GGTCCACGCG
CTCGAGGCGT ACGTCCTCAA CCCGAAGATC ATGGGCGACG CGGCCCGGAT CCACCCGGTG
CTCATCGTGC TGGCGCTGGT GGTGGGCGAG CGCAGCTTCG GGATCGTGGG CGCGCTGCTG
GCGGTGCCGG TGGCGAGCGT GGTGGTCGCG GTCTTCCGCT TCCTGCACCG GAAGCAGGTC
GAGCTGGACG AGCGCGCCGC CGTCCCGGTC GTCCAGAGCG TCTCCGCAGC GCCGGGACCG
GCCCCGTCAA CGCCGGACCA GAAAGGGAGC CCCACATGA
 
Protein sequence
MQTDLPLWRR PRTRLYALTA LLWVMMLGVV ALAWPVLLPF TLAGLAAYVI DPVIAGIARQ 
RVAGRPVPRV AAVLVVYAVL GTLVWIAAVS ILPAVYREAI RALLELRDFL ASITPERVQE
WTRAIDAFLQ RYGIPLDVTP STGGLDTPGG RFSVDLAAGM ASALHDLTLA LRGRVSDVVA
FSRAILAGTI QTLFFVVLLF MLTAFISMDA PRILRWFETV VPSHWRADLR RLRAGIDAGL
SGVVRGQLTI MVVNGILTLI GLLVLKVPFA FALGFLAFVL YIVPIFGTIL SSVPIVLLAL
TGGGPTKALL ALGWITVVHA LEAYVLNPKI MGDAARIHPV LIVLALVVGE RSFGIVGALL
AVPVASVVVA VFRFLHRKQV ELDERAAVPV VQSVSAAPGP APSTPDQKGS PT