Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_3326 |
Symbol | |
ID | 7300218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 3703491 |
End bp | 3704231 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 643596135 |
Product | short chain dehydrogenase |
Protein accession | YP_002493726 |
Protein GI | 220918422 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACGA CGACTGGGGC CGGGCTGAAG GATCGGACGG TGGTGGTGGT GGGCGGCGGG TCGGGCATCG GCCTCGCGGT CGCGCGGGAG GCGCTGGCGC GCGGCGCGGA GGTGGTGCTG GCGGGGCGCT CCCGGGAGCG CCTGGCGCGC GCGCTCGGAA CGCTCGGCGC CGGCGCGCGG GCGCGGGCCG TCGCGGCCGA CGTCCGGCAG GAGGACGAGG TGATGCGGCT GTTCCGGGAG GTCCCGGCCG CCGACCACGT GGTCGCGACG GCGGTCGTGC CCGCGTACCA GCCCATCGCC GCGTTCGACC TCGAGGCGGC CCGCGCGGTG GTGGACTCGA AGCTGCTCGG CGCGCTGCTG CTCGCGAAGC ACGGGGCGCC CAGGCTGCGG CCGGGCGGCT CGCTCACGTT CACCACCGGG ATCGCCGCGG ATCGCCCGAT GCCACGGGGC GCGATGATCG CCGCCGTGAA CGGCGCGCTG GCCGCCTTCG TGCGGGCCGC GGCGCTGGAG CTCGCCCCGC TGCGGGTGAA CGCGCTCTCG CCCGGGTGGG TGGACACGGA GATCTGGGAC GCGGTCGCCG GCGACGGCAA GGCGGCGACG TTCGCCGCGA TGGCCGAGCG GCTCCCCGCC CGCCGGATCG GGCGGCCGGA GGACGTCGCC CACGCCGCCG CGTTCCTGAT GGAGAACGGC TTCACCACCG GGAGCGTGCT CCGGGTGGAC GGGGGGCATC CGCTGGTCTA G
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Protein sequence | MTTTTGAGLK DRTVVVVGGG SGIGLAVARE ALARGAEVVL AGRSRERLAR ALGTLGAGAR ARAVAADVRQ EDEVMRLFRE VPAADHVVAT AVVPAYQPIA AFDLEAARAV VDSKLLGALL LAKHGAPRLR PGGSLTFTTG IAADRPMPRG AMIAAVNGAL AAFVRAAALE LAPLRVNALS PGWVDTEIWD AVAGDGKAAT FAAMAERLPA RRIGRPEDVA HAAAFLMENG FTTGSVLRVD GGHPLV
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