Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_3225 |
Symbol | |
ID | 7297902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 3582839 |
End bp | 3583846 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 643596034 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_002493625 |
Protein GI | 220918321 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.837895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCACCCAG TCCAACGCAC CGTGCTGGTG ACCGGGGCGA CCGGCTTCGT GGGGAGCGCG CTGGTGCCGG CGCTCGCCGC GGCCGGGCAC CGGGTCCGCG CCACGAGTCG CCGCCGCCGC GCCGGGCCGG GCGGGACGGT GGACTGGATG GCGGTGGACG TCCGGCGGCC GGACGACCTC GAGCGCGCGC TGGACGGCGT GGACGCGGCG TACTTCCTGG TGCACGGGAT GGCCGCGGGC CGGGGAGACT ACGTCGAGGA GGAGCGCCGC ACCGCCGCCG GCTTCGTGCG GGCGGCGGAG CGGGCCGGGA CGGGGCGCAT CGTGTACCTG GGCGGCGTCG CGCCGCAGGG AACGCCCTCC CGGCACCTCG CCAGCCGCCT CGCGGTCGGG GAGGTGCTGC GCGCCGGTCG CGTGCCCGCC CTGGAGCTGC GCGCGTCGAT GATCGTGGGC GCGGGCAGCG CCTCGTGGCA GGTGGTGCGC GACCTGGCGA TGCGCCTGCC GGTGATGCTG CTGCCGGCGT GGGCCCGTTC GCGCACCTGC CCGGTCTGGA TCGGCGACGT GGTGGGCGCG CTGGTGGCCG GGATCGACCT GCCGCTGCCG GCGAGCGCGG TTCACGACCT GCCCGGCCCG GACGTGCTGG AGGTGCGGGA GATCCTGGAG CGGGTGGCGG CGCTCCGCGG GCGGCGCCTG CCCGCCGCCC GCGTGCCGCT GCCGGTGCCG CGCGTCTCCA TGCTCTGGCT GAAGCTGATC TCCGGCGCGG ACTGGCGGGT GGTGCGCGAG CTGGTGCAGG GGCTGGCGAC CGACCTCCTT CCGCGCGAGG CCCGCTTCTG GCAGCTCGCC GGGCTGCCCG CGCCGTTGCC GTTCGACGAG GCCGCGCGCC GCGCGCTGGC CGGCGAGCCC GCCGGCGAGG GGCTGCGCGG CGCGATGGCG GCGCTCGAGG AGGCGCTGGT GGATCGCTGT GCGCCGCGGC TCGGGCCGGT CAGCCCGGGG GAGCCACGGT CGCGATGA
|
Protein sequence | MHPVQRTVLV TGATGFVGSA LVPALAAAGH RVRATSRRRR AGPGGTVDWM AVDVRRPDDL ERALDGVDAA YFLVHGMAAG RGDYVEEERR TAAGFVRAAE RAGTGRIVYL GGVAPQGTPS RHLASRLAVG EVLRAGRVPA LELRASMIVG AGSASWQVVR DLAMRLPVML LPAWARSRTC PVWIGDVVGA LVAGIDLPLP ASAVHDLPGP DVLEVREILE RVAALRGRRL PAARVPLPVP RVSMLWLKLI SGADWRVVRE LVQGLATDLL PREARFWQLA GLPAPLPFDE AARRALAGEP AGEGLRGAMA ALEEALVDRC APRLGPVSPG EPRSR
|
| |