Gene A2cp1_3178 details

Gene Information

• Locus tag: A2cp1_3178
• ID: 7297717
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter dehalogenans 2CP-1
• Kingdom: Bacteria
• Replicon accession: NC_011891
• Strand: +
• Start bp: 3521806
• End bp: 3522441
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 643595988
• Product: TPR repeat-containing protein
• Protein accession: YP_002493579
• Protein GI: 220918275
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG4235] Cytochrome c biogenesis factor

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0335083
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACCGTA ACACCGTCAT CGCCCTCGTC GTGGGGCTCG TGGTCGGCTT CCTGATCGGC 
CAGCTGGCCT CGAGGCGGGA TCAGGTGACG TCCGTCCCAG TGGTCGCCGC GCCCACCGGC 
ACGCCGGCGA TGCCGGCCAT GCCGCCCGGC GGGATGGGCG GGCTGCCCGC GCCGATGCCC 
TCGCCCGGCG CCAGCATGGA CCTGCAGGCC CGCATCACCG CCGCCGAGCA GATCGTCGCG 
AAGGACCCCA GGAACGTCCG CGCCTGGATC CAGCTCGGCA ACGACTACTT CGACTCGCGC 
CAGGCGCAGA AGGCGGTCGA GGCCTACGGG CGCGCGCTCG AGCTCGAGCC CAACAACCCC 
GACGTCCTCA CCGACCAGGG CGTGATGTAC CGGGACCTCG GCAACTTCGA CAAGGCGATC 
GCCAACTTCA AGAAGGCGAA CGAGGTCGAT CCGAAGCACG TGCAGAGCCT GTTCAACCTC 
GGCGTGGTCT ACCTGCACGA TCTCCAGGAC GCGGACAAGG CCGCGAAGGC CTGGAACCAG 
GTGATCTCGG CCGCGCCGAC GAGCCCGCAG GCGCAGCAGG CGCAGCAGGC GCTGACGCAG 
CTCAAGGCGA ACCCGCCGCC GCCGAAGAAG AAGTAG 

 

Protein sequence

MNRNTVIALV VGLVVGFLIG QLASRRDQVT SVPVVAAPTG TPAMPAMPPG GMGGLPAPMP 
SPGASMDLQA RITAAEQIVA KDPRNVRAWI QLGNDYFDSR QAQKAVEAYG RALELEPNNP 
DVLTDQGVMY RDLGNFDKAI ANFKKANEVD PKHVQSLFNL GVVYLHDLQD ADKAAKAWNQ 
VISAAPTSPQ AQQAQQALTQ LKANPPPPKK K