| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_2690 |
|---|
| Symbol | |
|---|
| ID | 7299691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 2968342 |
|---|
| End bp | 2969268 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 84% |
|---|
| IMG OID | 643595493 |
|---|
| Product | Tetratricopeptide domain protein |
|---|
| Protein accession | YP_002493093 |
|---|
| Protein GI | 220917789 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.128582 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGTC CCGTCCTCCT CCTCTGGCTG GCCGTGCTCG TCGCCGGGCC GCCGGCGCGC
GCCGCCGAGC CGTCGGCACA CGCGGCGGCG CTCGAGGCGC AGGGCGCGGC CCGTCGCCGG
CTGGGCGACG CCGCCGGCGC GCTCGAGGCC TACCGCCAGG CGGTGCGCGC CGCGCCCGAG
TGGGCGGAGC CGCGCGCGGC CCTGGGCGAG CTCCTGCTCG CGGCGGGCTC CGCCGCCGAC
GCGGCCGAGG CGTTCGCGGT GGCGGCGCGC CTGTCGCCGG AGCTGGCGCC GGCGTGGTGC
GGGCTGGCGG TCGCGGCGCG GCGGGCCGGC GAGGCCGGGC GGGCCGCCGA GGCAGGGCGC
CGCTGCACCG GGCTCCGCCC CGACGACGCC GCCGCGTGGC GCGCGCTCGC CGAGGCGCTG
CGCGACGCCG GCGACGCCGC CGGGGCCGTC CGCGCCCGCG AGGCCGAGCT GCGGCTGGCG
GAGGCGGGCG GCGCGCCCGC GGCCGAGCTG GAGGCGGCCC GCGCCGCGCT CGCGGCCGAC
CGGGCGGCGG CCGAGGCGCC GGCCTCCGGC GAGGGGCTGG AGCCGCCGCC GCCGAACGCC
GCCGCCGTGG CGAAGCTCGC GCAGGGTGAC CGCGCGTTCA CGGCAGGTGA GTACCGCGCG
GCGCTGTTCG CGTACCAGGA CGCGGTCTAC GTCGATCCCG GCAGCGCGCC GGCGCGGGTG
AAGCTCGGCC GCGCGTACCT GGCGCTGCGC TACGCGGAGC AGGCGCTCGC GCAGGCCGAG
CAGGCGCTCG CGCTCGACCC GTCGAGCGCC GACGCCCGCC GCCTGGCGGT CGAGGCCGGC
GGGGCGCCCC CGCCCGCCGC GCCCACGCCG TCCGCGGGGA GCGCGCCGGC GACGACGGAC
GCCGCGACGT CCGCGCTGCA GCCCTGA
|
|---|
| Protein sequence | MRRPVLLLWL AVLVAGPPAR AAEPSAHAAA LEAQGAARRR LGDAAGALEA YRQAVRAAPE
WAEPRAALGE LLLAAGSAAD AAEAFAVAAR LSPELAPAWC GLAVAARRAG EAGRAAEAGR
RCTGLRPDDA AAWRALAEAL RDAGDAAGAV RAREAELRLA EAGGAPAAEL EAARAALAAD
RAAAEAPASG EGLEPPPPNA AAVAKLAQGD RAFTAGEYRA ALFAYQDAVY VDPGSAPARV
KLGRAYLALR YAEQALAQAE QALALDPSSA DARRLAVEAG GAPPPAAPTP SAGSAPATTD
AATSALQP
|
|---|
| |