Gene A2cp1_2511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_2511 
Symbol 
ID7296995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp2777196 
End bp2778326 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content71% 
IMG OID643595315 
Producthomocitrate synthase 
Protein accessionYP_002492915 
Protein GI220917611 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID[TIGR02146] homocitrate synthase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.365846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAGT CCACCTGGAA GCTCATCGAC TCGACGCTCC GCGAGGGCGA GCAGTTCGCC 
CACGGGACGT TCCGCACCGA GGACAAGCTC GAGATCGCGC GCGCGCTCGA CACGTTCGGG
GTCGAGTACG TCGAGGTGAC CAGCCCGGCC GCCTCGCCGC AGTCGCAGCG GGACGCGGTG
CAGATCGTGA AGCTCGGGCT CGGCGCGCGG GTCATCACCC ACTCGCGCTG CGTCCTCGAC
GACGTGCGCG CCGCCATCGA CACCGGCGTC CGCGGCATCG GCCTGCTCTT CGCGACCAGC
CGCATCCTCC GCGAGTCCTC GCACGGCAAG TCCATCCAGC AGATCATCGA CGCCATGGGG
CCGCCCATCG AGCTGGCGCT CAAGGCCGGC CTCGAGACGC GCTTCTCCGC CGAGGACGCG
TTCCGCAGCG AGGTGACGGA CCTGGTGGCG GTCTACCAGG CCGCCGAGCG GCTCGGCGTC
CACCGCGTCG GCATCGCCGA CACGGTCGGC ATCGCCACGC CGCGCCAGGT GTTCGCGCTG
GTGCGCGAGA TCCGGCGCGC GGTCCGCTGC GACATCGGGT TCCACGGCCA CAACGACACC
GGGTGCTGCA TCGCGAACGC CTACGAGGCC CTGGCCGCCG GCGCCACCCA CGTGGACGTG
GCGGTGCTGG GGATCGGCGA GCGCGTCGGC ATCACCCCGC TCGGCGGCAT CATCGCGCGC
ATGTTCTCCA TCGAGCCGCA GTCGGTGGCG GAGCGCTACC GGCTCGGCCA GCTCCGCGAG
CTGGAGCGGC TGGTGGCCCG GGTCACCGGC ATCGAGGTCC CGTTCAACAA CTACGTGACC
GGCGAGACCG CGTACTCGCA CAAGGCCGGG ATGCACCTGA AGGCCATGAT GGCGAACCCC
GGCTCCTACG AGATCATCCC GCCGGAGGCG TTCGGCCTCA CCCGGCGCCT GATCCTGGGC
AGCCGCCTCA CCGGCCGGCA CGCCATCGCC TACCGGGCGC GCGAGATGGG CATCACGTTC
GGCGAGACCG AGCTGAAGGC GCTCACCAAG CGCATCAAGG AGCTGGCGGA CGCCGGCGAG
CTGTCGGAGG AGCAGATCGA CCGGGTCCTG CGCGACTGGG TGACGGCTTG A
 
Protein sequence
MTKSTWKLID STLREGEQFA HGTFRTEDKL EIARALDTFG VEYVEVTSPA ASPQSQRDAV 
QIVKLGLGAR VITHSRCVLD DVRAAIDTGV RGIGLLFATS RILRESSHGK SIQQIIDAMG
PPIELALKAG LETRFSAEDA FRSEVTDLVA VYQAAERLGV HRVGIADTVG IATPRQVFAL
VREIRRAVRC DIGFHGHNDT GCCIANAYEA LAAGATHVDV AVLGIGERVG ITPLGGIIAR
MFSIEPQSVA ERYRLGQLRE LERLVARVTG IEVPFNNYVT GETAYSHKAG MHLKAMMANP
GSYEIIPPEA FGLTRRLILG SRLTGRHAIA YRAREMGITF GETELKALTK RIKELADAGE
LSEEQIDRVL RDWVTA