Gene A2cp1_2030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_2030 
SymbolrplE 
ID7300157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp2277878 
End bp2278420 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content65% 
IMG OID643594825 
Product50S ribosomal protein L5 
Protein accessionYP_002492437 
Protein GI220917133 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0094] Ribosomal protein L5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0708246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCGC GTTTGAAGGA GCGGTACGAC AAGCAGCTTC GTGCCGAGCT GATGAAGGAG 
CTCGGGTTCG CGAACCCGAT GCAGGCCCCC CGCCTCGAGA AGATCGTGGT GAACATGGGC
CTGGGCGAGG CGATCAACAA CGGCAAGATC ATCGACGCGT CCGTCGAGCA GCTCGCCGCG
ATCACCGGCC AGAAGCCGGT CGTGACCCGC GCCCGCAAGT CGATCGCCAA CTTCAAGCTG
CGCCAGGGCC AGTCCATCGG CGCCATGGTC ACGCTGCGCG GCGACCGGAT GTACGAGTTC
TTCGACCGCC TGGTCTCGAT CGCGCTGCCG CGCGTCCGCG ACTTCAAGGG CGTGTCGCCG
AAGGCCTTCG ACGGGAAGGG CAACTACACG CTCGGCGTCC GCGAGCAGAT CATCTTCCCG
GAGATCAACT ACGACAAGGT CGAGAAGATC AAGGGCCTCA ACATCACGGT GGTGACCACC
GCCCGGAACG ACGAAGAGGG CCGAGCGCTG CTGCGCCACC TCGGCATGCC GTTCCGTCAG
TAG
 
Protein sequence
MAARLKERYD KQLRAELMKE LGFANPMQAP RLEKIVVNMG LGEAINNGKI IDASVEQLAA 
ITGQKPVVTR ARKSIANFKL RQGQSIGAMV TLRGDRMYEF FDRLVSIALP RVRDFKGVSP
KAFDGKGNYT LGVREQIIFP EINYDKVEKI KGLNITVVTT ARNDEEGRAL LRHLGMPFRQ