Gene A2cp1_1781 details

Gene Information

• Locus tag: A2cp1_1781
• ID: 7298521
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter dehalogenans 2CP-1
• Kingdom: Bacteria
• Replicon accession: NC_011891
• Strand: +
• Start bp: 1994042
• End bp: 1994476
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 643594576
• Product: putative PAS/PAC sensor protein
• Protein accession: YP_002492189
• Protein GI: 220916885
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.345246
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGACC CCGCCATCTA CCAGCAGATC GTCGACGGCA GCCCGGACGC GTTCATCCTC 
GGCGATCGCG AGGGGCGCAT CCGCATCTGG AACGCGGGCG CGGAGGCGAT CTTCGGCTTC 
ACCGCCGCCG AGGCGCTGGG CCAGTCCATG GACATCATCA TCCCGGAGCG GCTCCGCGGC 
CGTCACTGGG ACGGCTACAT GAAGACCATG CAGACCGGCA AGAGCCGCTA CGGCGCGGGC 
GACGTGCTCG CGGTGCCGGC CATCACGAAG GATGGCCGGA ACATCTCGAT CGAGTTCACG 
ATCCAGATGC TGCGGACGGC GGGCGGCGAG CTGCTCGGGC CGCTCGCCAT CATCCGCGAC 
GTGACGAAGC GCTTTCAGCG CGAGCGGGAG CTCGCGCGGC GCGTGAAGGA GCTGGAGGCC 
AAGGCAGGGG CGTGA 

 

Protein sequence

MTDPAIYQQI VDGSPDAFIL GDREGRIRIW NAGAEAIFGF TAAEALGQSM DIIIPERLRG 
RHWDGYMKTM QTGKSRYGAG DVLAVPAITK DGRNISIEFT IQMLRTAGGE LLGPLAIIRD 
VTKRFQRERE LARRVKELEA KAGA