Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_0913 |
Symbol | |
ID | 7298583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 1033174 |
End bp | 1035699 |
Gene Length | 2526 bp |
Protein Length | 841 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643593706 |
Product | glycogen/starch/alpha-glucan phosphorylase |
Protein accession | YP_002491331 |
Protein GI | 220916027 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0058] Glucan phosphorylase |
TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.910975 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCCCAC CGAGGAAAGC CGCCGTCGCC CGCACGGAGG AGGCGCGCGC GCTCGAGCGC GCCCGCGACC TGCCCAACGC CCGCACCGCG CTGGACGTGG ACGCGCTCCG CCGCGCGTTC GCCGACCACC TCCAGTACTC GCAGGGCAAG GACGAGCACA CCGCCACCCC GCTCGATCGG TACTTCGCGG TCGCCTATGC GGTGCGCGAC CGGATGATGC GGCGGTGGAT CCAGACGCAG CAGACCTACT ACAAGGCCGA CGCGAAGCGG GTCTACTACC TCTCGCTCGA GTTCCTGATG GGCAAGGCGC TCGAGAACAA CCTGCTGAAC CTCGGCATCT ACGACAACAT GCGGTCGGCC CTGAGCGACC TCGGGCTCGA CCTGAACGCG CTGCTGGAGC AGGAGCCCGA CGCCGGGCTG GGCAACGGCG GCCTGGGGCG GCTCGCCGCC TGCTTCCTGG ACTCGCTCGC CACGCTCTCG ATCCCCGCGT ACGGCTACGG GATCCGCTAC GAGTTCGGCA TCTTCGACCA GGAGATCCGC AACGGCTACC AGGTGGAGCG CCCGGAGGAG TGGCTGCGCT TCGGCAGCGC CTGGGAGATC CCGCGCGGCG ACGCCTGCGT GCCGGTCTCG TTCTACGGGC GGACCGAGCA CGGCGTGGAC GAGAAGGGCC GGCTGCAGGT GCGCTGGGCG GACGCGCGCC ACGTGCTGGG CATGCCCTAC GACGTGCCCA TCACCGGCCA CGGCAACCAG ACCGTCAACA CGCTGCGGCT CTGGCGCGCC CGCGCGTCGC AGGAGCTGGA CCTCGCCGAC TTCAACGCCG GCGATTACCT GTCGGCGGTC GAGGAGAAGG ACCTCTCGGA GAACATCTCC AAGGTCCTCT ACCCGAACGA CCTCACCGTG ATGGGCAAGG AGCTGCGGCT CCAGCAGCAG TACTTCTTCG TCTGCTGCTC CATCCACGAC ATCGTGAACC GCCACCTCAA GATGCACGAG GGCTTCTCCG ACTTCCCGGA CAAGGTGGCG ATCCAGATGA ACGACACGCA CCCGGCCATC GCGGTGGCCG AGCTGATGCG GGTCCTGGTG GACGAGCACG GGCTGGAGTG GGGGAAGGCC TGGGAGATCT GCGGCGGCAC GTTCGGCTAC ACCAACCACA CGCTGATGCC CGAGGCGCTG GAGAAGTGGT CGGTGGACCT GTTCGGCCGG GTGCTGCCGC GCCACCTCGA GATCGTCTTC GAGGTGAACC GGCGGTTCCT GGACGGCGTG CGCGCCGCGC GCAAGGCGGA CGAGCCGGCG CTGCAGCGCA TGAGCCTCAT CGAGGAGGGG CCGGTCAAGC AGGTGCGCAT GGCGAACCTG GCGGTGATCG GCTCGCACTC GGTGAACGGC GTGGCCGCGC TCCACACCGA GCTGCTGAAG CGCGAGCTGT TCCACGACTT CCACGCGCTC TGGCCGGAGC GGTTCAACAA CAAGACGAAC GGCGTGACGC CGCGGCGCTG GCTCCTGCAG GCGAACCCCG CGCTGGCGCG GTCGATCAGC GAGGTCATCG GGCCGGGCTG GGTGACGGAC GCGGCCCAGC TCCGCAACCT CGAGCCGCTC GCCGAGGACG CGGGCTTCCG CCGCCTGTTC CGCGACGTGA AGCGCGACAA CAAGGAGCGG CTCGCCGGGA TCGTCCGCGT CGAGAACGGG ATCTCGCTCG ACCTCGACTC GATCTTCGAC GTCCAGGTGA AGCGCATCCA CGAGTACAAG CGGCAGCTGC TCGCGATCCT GCGGGTGGCG AGCGAGTACC TCCGGCTCAA GGAGGAGCGG GGCTACGACC CGTACCCGCG CAGCTACCTG TTCGGCGGCA AGGCGGCGCC GGGCTACGCG ATGGCGAAGT GGATCATCAA GCTCGTCGGC TCGGTGGCCG ACGTGGTGAA CCGGGACGTG GACGTCCGCG GCCGCATCGC GGTGGCGTTC CTGCGCAACT ACCGGGTGTC GCTCGCCGAG CGGATCTTCC CGGCGGCCGA GGTGTCCGAG CAGATCTCCA CCGCCGGGAA GGAGGCCTCG GGCACCGGCA ACATGAAGTT CGCGCTGAAC GGCGCGCTCA CCGTCGGGAC GCTCGACGGC GCGAACGTGG AGATCCGCGA GGAGGTGGGC GCGGAGAACT TCTTCCTGTT CGGGCTCACC GTGGAGGAGG TCGCGGCGCT GCGGAAGGGC GGCTACGACC CGTGGGAGTG GTACCGCAAG GACCGCCGCA TCAAGCAGGT GCTCGACGCG CTGTCCTCGG GCGTGTTCTC GCCGGGCGAG CCGGGGCTGT TCCGGCCGGT GGTCGAGTCG CTCCTCAACG GCGGGGATCC GTACCTGGTG CTGGCGGACT TCGCCGCCTA CTGCTCCTGC CAGGAGCGGG TGGAGCAGGC CTACCGCGAT CCGGACGGCT GGACCCGCAA GGCGATCCTC AACGTGGCGC GCGCCGGGAA GTTCTCGTCC GACCGGACGA TCCACGAGTA CGCGACCGAG ATCTGGAACG TGCCGCCGGT GCGGGTGGTG GAGTAG
|
Protein sequence | MPPPRKAAVA RTEEARALER ARDLPNARTA LDVDALRRAF ADHLQYSQGK DEHTATPLDR YFAVAYAVRD RMMRRWIQTQ QTYYKADAKR VYYLSLEFLM GKALENNLLN LGIYDNMRSA LSDLGLDLNA LLEQEPDAGL GNGGLGRLAA CFLDSLATLS IPAYGYGIRY EFGIFDQEIR NGYQVERPEE WLRFGSAWEI PRGDACVPVS FYGRTEHGVD EKGRLQVRWA DARHVLGMPY DVPITGHGNQ TVNTLRLWRA RASQELDLAD FNAGDYLSAV EEKDLSENIS KVLYPNDLTV MGKELRLQQQ YFFVCCSIHD IVNRHLKMHE GFSDFPDKVA IQMNDTHPAI AVAELMRVLV DEHGLEWGKA WEICGGTFGY TNHTLMPEAL EKWSVDLFGR VLPRHLEIVF EVNRRFLDGV RAARKADEPA LQRMSLIEEG PVKQVRMANL AVIGSHSVNG VAALHTELLK RELFHDFHAL WPERFNNKTN GVTPRRWLLQ ANPALARSIS EVIGPGWVTD AAQLRNLEPL AEDAGFRRLF RDVKRDNKER LAGIVRVENG ISLDLDSIFD VQVKRIHEYK RQLLAILRVA SEYLRLKEER GYDPYPRSYL FGGKAAPGYA MAKWIIKLVG SVADVVNRDV DVRGRIAVAF LRNYRVSLAE RIFPAAEVSE QISTAGKEAS GTGNMKFALN GALTVGTLDG ANVEIREEVG AENFFLFGLT VEEVAALRKG GYDPWEWYRK DRRIKQVLDA LSSGVFSPGE PGLFRPVVES LLNGGDPYLV LADFAAYCSC QERVEQAYRD PDGWTRKAIL NVARAGKFSS DRTIHEYATE IWNVPPVRVV E
|
| |