| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_0289 |
|---|
| Symbol | |
|---|
| ID | 7298991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 322518 |
|---|
| End bp | 322937 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643593084 |
|---|
| Product | Biopolymer transport protein ExbD/TolR |
|---|
| Protein accession | YP_002490714 |
|---|
| Protein GI | 220915410 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.231798 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATGG ACGTTGGCGG CAAGGGGGTG AAGAGCGAGA TCAACGTGAC GCCGCTCGTC
GACGTCGTGT TGGTGCTCCT CATCATCTTC ATGGTCATCA CCCCGATGCT CCAGCGCGGC
AAGCCGGTCG TCCTCCCGGA CGCGAAGCAC GTCTCCGCGC TGAAGCAGGG CGGTGACCCG
ATCCTCGTGT CGGTGACGAA GGACGGGAAG ATCTGGATCG ACAAGGAGGA GGTCCAGAAG
GCGGACCTCT CCCAGATGCT CACCATCGCG ATGCAGATGC AGCCGGGCGC GCCGGTGCTG
GTGAAGGGCG ACCGCGACGT GACCTACAAG ACCATCCGCG AGATGATCTT CGAGATCTCG
AAGACGCACA TCATGGGCGT CTCCCTCGCC GCGTCCCAGA TCAAGGACAA GGAGAAGTAG
|
|---|
| Protein sequence | MSMDVGGKGV KSEINVTPLV DVVLVLLIIF MVITPMLQRG KPVVLPDAKH VSALKQGGDP
ILVSVTKDGK IWIDKEEVQK ADLSQMLTIA MQMQPGAPVL VKGDRDVTYK TIREMIFEIS
KTHIMGVSLA ASQIKDKEK
|
|---|
| |