21 Unclonable genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
Pnec_0044  CDS  NC_010531  52877  52981  105  hypothetical protein  YP_001796986  unclonable  2.69005e-14  hitchhiker  4.99505e-21  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0045  CDS  NC_010531  53034  53414  381  30S ribosomal protein S12  YP_001796987  unclonable  9.13228e-14  hitchhiker  7.76086e-21  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0048  CDS  NC_010531  56222  57412  1191  elongation factor Tu  YP_001796990  unclonable  2.6192e-12  decreased coverage  9.37064e-25  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0049  CDS  NC_010531  57529  57840  312  30S ribosomal protein S10  YP_001796991  unclonable  2.91739e-14  decreased coverage  2.20907e-25  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0050  CDS  NC_010531  58039  58695  657  50S ribosomal protein L3  YP_001796992  unclonable  1.05165e-13  decreased coverage  1.58179e-26  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0051  CDS  NC_010531  58707  59327  621  50S ribosomal protein L4  YP_001796993  unclonable  6.2417e-14  hitchhiker  3.36643e-25  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0052  CDS  NC_010531  59324  59638  315  50S ribosomal protein L23  YP_001796994  unclonable  1.36053e-14  hitchhiker  3.59649e-24  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0053  CDS  NC_010531  59641  60471  831  50S ribosomal protein L2  YP_001796995  unclonable  1.39225e-13  hitchhiker  1.23059e-22  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0054  CDS  NC_010531  60491  60769  279  30S ribosomal protein S19  YP_001796996  unclonable  1.30645e-14  hitchhiker  4.79919e-20  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0055  CDS  NC_010531  60774  61109  336  50S ribosomal protein L22  YP_001796997  unclonable  1.85707e-14  hitchhiker  6.04207e-20  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0056  CDS  NC_010531  61118  61933  816  ribosomal protein S3  YP_001796998  unclonable  1.80668e-13  hitchhiker  1.05173e-18  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0057  CDS  NC_010531  61936  62349  414  50S ribosomal protein L16  YP_001796999  unclonable  2.74594e-14  hitchhiker  4.45125e-19  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0058  CDS  NC_010531  62364  62558  195  50S ribosomal protein L29  YP_001797000  unclonable  7.83638e-15  hitchhiker  2.27015e-18  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0059  CDS  NC_010531  62571  62840  270  30S ribosomal protein S17  YP_001797001  unclonable  1.29273e-14  hitchhiker  1.52646e-17  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0060  CDS  NC_010531  63024  63392  369  50S ribosomal protein L14  YP_001797002  unclonable  1.71332e-14  hitchhiker  1.54022e-17  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0144    NC_010531  126450  127033  584      unclonable  1.03025e-13  normal  0.191017  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0185  CDS  NC_010531  166393  167622  1230  cell division protein FtsA  YP_001797104  unclonable  4.15608e-12  normal  0.589058  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_0453  CDS  NC_010531  402736  405339  2604  ATP-dependent chaperone ClpB  YP_001797337  unclonable  1.17348e-09  normal  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_1204  CDS  NC_010531  1042010  1044277  2268  Lysine decarboxylase  YP_001797963  unclonable  3.45453e-10  normal  0.552697  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_1549  CDS  NC_010531  1348941  1350029  1089  recA protein  YP_001798245  unclonable  2.05683e-12  normal  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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Pnec_R0005  rRNA  NC_010531  35994  38804  2811  23S ribosomal RNA    unclonable  4.15138e-09  hitchhiker  3.63122e-09  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria 
 
 
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