17 Unclonable genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
Pnuc_0039  CDS  NC_009379  42390  43580  1191  elongation factor Tu  YP_001154825  unclonable  1.35478e-09  n/a    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria 
 
 
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Pnuc_0052  CDS  NC_009379  60518  60829  312  30S ribosomal protein S10  YP_001154838  unclonable  1.49229e-11  n/a    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria 
 
 
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Pnuc_0053  CDS  NC_009379  61026  61682  657  50S ribosomal protein L3  YP_001154839  unclonable  5.06419e-11  n/a    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria 
 
 
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Pnuc_0062  CDS  NC_009379  65570  65839  270  30S ribosomal protein S17  YP_001154848  unclonable  4.14135e-12  n/a    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria 
 
 
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Pnuc_0063  CDS  NC_009379  66023  66391  369  50S ribosomal protein L14  YP_001154849  unclonable  8.10078e-12  n/a    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria 
 
 
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Pnuc_0064  CDS  NC_009379  66401  66709  309  50S ribosomal protein L24  YP_001154850  unclonable  6.43332e-12  n/a    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria 
 
 
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Pnuc_0065  CDS  NC_009379  66726  67268  543  50S ribosomal protein L5  YP_001154851  unclonable  1.46206e-11  n/a    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria 
 
 
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Pnuc_0132  CDS  NC_009379  126296  126880  585  phasin family protein  YP_001154917  unclonable  7.41228e-11  n/a    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria 
 
 
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Pnuc_0172  CDS  NC_009379  168035  169375  1341  cell division protein FtsZ  YP_001154957  unclonable  1.98295e-09  n/a    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria 
 
 
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Pnuc_0206  CDS  NC_009379  204635  204949  315  hypothetical protein  YP_001154991  unclonable  2.36502e-11  n/a    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria 
 
 
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Pnuc_0417  CDS  NC_009379  408206  408667  462  hypothetical protein  YP_001155201  unclonable  7.11828e-11  n/a    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria 
 
 
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Pnuc_0418  CDS  NC_009379  408733  409452  720  SOS-response transcriptional repressor, LexA  YP_001155202  unclonable  2.2739e-10  n/a    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria 
 
 
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Pnuc_0419  CDS  NC_009379  409512  410588  1077  asparaginase/glutaminase  YP_001155203  unclonable  7.49925e-10  n/a    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria 
 
 
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Pnuc_0447  CDS  NC_009379  437468  440071  2604  ATPase  YP_001155231  unclonable  3.33741e-07  n/a    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria 
 
 
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Pnuc_0873  CDS  NC_009379  868956  869885  930  pyruvate carboxyltransferase  YP_001155653  unclonable  2.64563e-10  n/a    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria 
 
 
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Pnuc_0874  CDS  NC_009379  870147  870722  576  hypothetical protein  YP_001155654  unclonable  3.63906e-11  n/a    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria 
 
 
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Pnuc_1887  CDS  NC_009379  1961885  1962307  423  OsmC family protein  YP_001156663  unclonable  2.80458e-11  n/a    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria 
 
 
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