10 Unclonable genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
Tbd_0405  CDS  NC_007404  437647  438291  645  50S ribosomal protein L3P  YP_314163  unclonable  3.24929e-11  normal  0.15101  Thiobacillus denitrificans ATCC 25259  Bacteria 
 
 
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Tbd_0858  CDS  NC_007404  906765  910190  3426  DNA polymerase III, alpha subunit  YP_314616  unclonable  3.42881e-05  normal  0.701952  Thiobacillus denitrificans ATCC 25259  Bacteria 
 
 
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Tbd_2181  CDS  NC_007404  2264206  2264799  594  hypothetical protein  YP_315939  decreased coverage  4.87122e-10  unclonable  2.13421e-07  Thiobacillus denitrificans ATCC 25259  Bacteria 
 
 
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Tbd_2182  CDS  NC_007404  2265058  2266302  1245  putative dioxygenase related to 2-nitropropane dioxygenase  YP_315940  hitchhiker  0.000148707  unclonable  2.79866e-07  Thiobacillus denitrificans ATCC 25259  Bacteria 
 
 
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Tbd_2183  CDS  NC_007404  2266331  2266783  453  hypothetical protein  YP_315941  normal  0.688747  unclonable  2.31276e-07  Thiobacillus denitrificans ATCC 25259  Bacteria 
 
 
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Tbd_2184  CDS  NC_007404  2266794  2267243  450  6-pyruvoyl tetrahydrobiopterin synthase  YP_315942  normal  0.452775  unclonable  2.38403e-07  Thiobacillus denitrificans ATCC 25259  Bacteria 
 
 
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Tbd_2185  CDS  NC_007404  2267257  2268150  894  hypothetical protein  YP_315943  normal  unclonable  2.88489e-07  Thiobacillus denitrificans ATCC 25259  Bacteria 
 
 
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Tbd_2186  CDS  NC_007404  2268158  2269159  1002  putative protease  YP_315944  normal  unclonable  3.52606e-07  Thiobacillus denitrificans ATCC 25259  Bacteria 
 
 
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Tbd_2187  CDS  NC_007404  2269149  2270099  951  hypothetical protein  YP_315945  normal  unclonable  3.45504e-07  Thiobacillus denitrificans ATCC 25259  Bacteria 
 
 
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Tbd_R0009  rRNA  NC_007404  478097  479599  1503  16S ribosomal RNA    unclonable  2.57641e-09  normal  Thiobacillus denitrificans ATCC 25259  Bacteria 
 
 
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