10 homologs were found in PanDaTox collection
for query gene YpAngola_0007 on replicon NC_010158
Organism: Yersinia pestis Angola



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010158  YpAngola_0007  pesticin  100 
 
 
357 aa  731    Yersinia pestis Angola  Bacteria  normal  0.112425  normal  0.0257696 
 
 
-
 
NC_010158  YpAngola_0021  pesticin  100 
 
 
357 aa  731    Yersinia pestis Angola  Bacteria  normal  0.750323  normal 
 
 
-
 
NC_011311  VSAL_p840_46  putative cell wall degradation protein  28.57 
 
 
739 aa  101  2e-20  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0169743  n/a   
 
 
-
 
NC_011312  VSAL_I0031  putative cell wall degradation enzyme  28.1 
 
 
739 aa  99.8  6e-20  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_2612  pesticin domain-containing protein  28.09 
 
 
192 aa  70.9  0.00000000003  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_0732  pesticin domain-containing protein  26.86 
 
 
185 aa  60.1  0.00000006  Shewanella sp. MR-7  Bacteria  hitchhiker  0.00113728  normal  0.116352 
 
 
-
 
NC_012912  Dd1591_1774  hypothetical protein  29.32 
 
 
697 aa  46.2  0.0008  Dickeya zeae Ech1591  Bacteria  normal  0.426003  n/a   
 
 
-
 
NC_011769  DvMF_2070  hypothetical protein  25.68 
 
 
491 aa  44.3  0.003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_0775  flocculin repeat-containing protein  29.27 
 
 
289 aa  43.9  0.005  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.555697 
 
 
-
 
NC_009656  PSPA7_2654  hypothetical protein  23.68 
 
 
334 aa  43.1  0.007  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>