266 homologs were found in PanDaTox collection
for query gene YPK_3000 on replicon NC_010465
Organism: Yersinia pseudotuberculosis YPIII



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010465  YPK_3000  UMP phosphatase  100 
 
 
250 aa  517  1e-146  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.161111  n/a   
 
 
-
 
NC_009708  YpsIP31758_2912  UMP phosphatase  100 
 
 
250 aa  517  1e-146  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.00141408  n/a   
 
 
-
 
NC_010159  YpAngola_A0335  UMP phosphatase  98.8 
 
 
248 aa  504  9.999999999999999e-143  Yersinia pestis Angola  Bacteria  hitchhiker  0.00626353  normal 
 
 
-
 
NC_009832  Spro_1224  UMP phosphatase  87.95 
 
 
250 aa  471  1e-132  Serratia proteamaculans 568  Bacteria  normal  0.387552  normal  0.0757281 
 
 
-
 
CP001509  ECD_00632  UMP phosphatase  86 
 
 
250 aa  459  9.999999999999999e-129  Escherichia coli BL21(DE3)  Bacteria  hitchhiker  0.0000712953  n/a   
 
 
-
 
CP001637  EcDH1_2962  HAD-superfamily hydrolase, subfamily IIA  86 
 
 
250 aa  459  9.999999999999999e-129  Escherichia coli DH1  Bacteria  hitchhiker  0.000000529801  n/a   
 
 
-
 
NC_009800  EcHS_A0719  UMP phosphatase  86 
 
 
250 aa  459  9.999999999999999e-129  Escherichia coli HS  Bacteria  hitchhiker  0.000961731  n/a   
 
 
-
 
NC_010658  SbBS512_E0576  UMP phosphatase  86 
 
 
250 aa  459  9.999999999999999e-129  Shigella boydii CDC 3083-94  Bacteria  normal  0.0275278  n/a   
 
 
-
 
NC_012892  B21_00623  hypothetical protein  86 
 
 
250 aa  459  9.999999999999999e-129  Escherichia coli BL21  Bacteria  hitchhiker  0.0000726106  n/a   
 
 
-
 
NC_009801  EcE24377A_0700  UMP phosphatase  86 
 
 
250 aa  459  9.999999999999999e-129  Escherichia coli E24377A  Bacteria  hitchhiker  0.0000385389  n/a   
 
 
-
 
NC_010498  EcSMS35_0695  UMP phosphatase  86 
 
 
250 aa  459  9.999999999999999e-129  Escherichia coli SMS-3-5  Bacteria  hitchhiker  0.00424094  normal 
 
 
-
 
NC_010468  EcolC_2981  UMP phosphatase  86 
 
 
250 aa  459  9.999999999999999e-129  Escherichia coli ATCC 8739  Bacteria  hitchhiker  0.00141438  normal 
 
 
-
 
NC_011353  ECH74115_0766  UMP phosphatase  86 
 
 
250 aa  459  9.999999999999999e-129  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.0000485352  normal 
 
 
-
 
NC_011083  SeHA_C0800  UMP phosphatase  84.8 
 
 
250 aa  456  1e-127  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A0787  UMP phosphatase  84.8 
 
 
250 aa  456  1e-127  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.16155  normal  0.744456 
 
 
-
 
NC_011149  SeAg_B0728  UMP phosphatase  84.8 
 
 
250 aa  456  1e-127  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.00149934  n/a   
 
 
-
 
NC_011080  SNSL254_A0740  UMP phosphatase  84.8 
 
 
250 aa  456  1e-127  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.0218888  normal  0.752742 
 
 
-
 
NC_011094  SeSA_A0836  UMP phosphatase  84.8 
 
 
250 aa  456  1e-127  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_1190  UMP phosphatase  84 
 
 
250 aa  452  1.0000000000000001e-126  Enterobacter sp. 638  Bacteria  normal  0.0114642  hitchhiker  0.000177666 
 
 
-
 
NC_004347  SO_2762  UMP phosphatase  73.39 
 
 
248 aa  395  1e-109  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_2382  UMP phosphatase  73.39 
 
 
248 aa  395  1e-109  Shewanella sp. MR-4  Bacteria  normal  0.0204611  normal 
 
 
-
 
NC_008322  Shewmr7_2454  UMP phosphatase  73.39 
 
 
248 aa  395  1e-109  Shewanella sp. MR-7  Bacteria  normal  0.010587  normal  0.0654899 
 
 
-
 
NC_008577  Shewana3_2547  UMP phosphatase  73.39 
 
 
248 aa  395  1e-109  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.0000020241  normal  0.838797 
 
 
-
 
NC_009997  Sbal195_1771  UMP phosphatase  72.58 
 
 
248 aa  393  1e-108  Shewanella baltica OS195  Bacteria  decreased coverage  0.00000884824  normal 
 
 
-
 
NC_011663  Sbal223_2551  UMP phosphatase  72.58 
 
 
248 aa  393  1e-108  Shewanella baltica OS223  Bacteria  unclonable  0.00000000346964  unclonable  0.00000000000937616 
 
 
-
 
NC_008700  Sama_2099  UMP phosphatase  72.87 
 
 
248 aa  393  1e-108  Shewanella amazonensis SB2B  Bacteria  normal  0.204469  normal  0.749352 
 
 
-
 
NC_009665  Shew185_1728  UMP phosphatase  72.58 
 
 
248 aa  393  1e-108  Shewanella baltica OS185  Bacteria  decreased coverage  0.0000000338596  n/a   
 
 
-
 
NC_009901  Spea_2581  UMP phosphatase  72.58 
 
 
248 aa  392  1e-108  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_1733  UMP phosphatase  72.58 
 
 
248 aa  393  1e-108  Shewanella baltica OS155  Bacteria  hitchhiker  0.000000210359  n/a   
 
 
-
 
NC_009438  Sputcn32_1594  UMP phosphatase  72.18 
 
 
248 aa  391  1e-108  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.000000000808476  n/a   
 
 
-
 
NC_008345  Sfri_1605  UMP phosphatase  71.77 
 
 
248 aa  388  1e-107  Shewanella frigidimarina NCIMB 400  Bacteria  unclonable  0.00000000109056  n/a   
 
 
-
 
NC_009092  Shew_1511  UMP phosphatase  74.19 
 
 
252 aa  389  1e-107  Shewanella loihica PV-4  Bacteria  unclonable  0.0000000195754  normal  0.444742 
 
 
-
 
NC_009831  Ssed_1840  UMP phosphatase  71.77 
 
 
248 aa  387  1e-106  Shewanella sediminis HAW-EB3  Bacteria  normal  0.272737  normal 
 
 
-
 
NC_010506  Swoo_2746  UMP phosphatase  69.76 
 
 
248 aa  384  1e-105  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.000000506878  hitchhiker  0.000386966 
 
 
-
 
NC_007954  Sden_1840  UMP phosphatase  71.77 
 
 
248 aa  384  1e-105  Shewanella denitrificans OS217  Bacteria  unclonable  0.00000000000453857  n/a   
 
 
-
 
NC_008726  Mvan_2196  HAD family hydrolase  51.64 
 
 
271 aa  256  3e-67  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.467237 
 
 
-
 
NC_008146  Mmcs_1975  HAD family hydrolase  50.6 
 
 
257 aa  255  5e-67  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_2021  HAD family hydrolase  50.6 
 
 
257 aa  255  5e-67  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_35270  predicted sugar phosphatase of HAD superfamily  50.4 
 
 
257 aa  254  6e-67  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1955  HAD family hydrolase  50.6 
 
 
257 aa  254  8e-67  Mycobacterium sp. JLS  Bacteria  normal  normal  0.363597 
 
 
-
 
NC_013530  Xcel_3145  HAD-superfamily hydrolase, subfamily IIA  48.59 
 
 
257 aa  249  3e-65  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.386829  n/a   
 
 
-
 
NC_014151  Cfla_2972  HAD-superfamily hydrolase, subfamily IIA  49.4 
 
 
257 aa  247  1e-64  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_3022  HAD family hydrolase  46.99 
 
 
259 aa  245  4e-64  Salinispora tropica CNB-440  Bacteria  normal  0.446988  normal  0.662219 
 
 
-
 
NC_009953  Sare_3248  HAD family hydrolase  47.39 
 
 
259 aa  244  9.999999999999999e-64  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4181  HAD-superfamily hydrolase, subfamily IIA  48.16 
 
 
260 aa  243  1.9999999999999999e-63  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.646523  n/a   
 
 
-
 
NC_012669  Bcav_3643  HAD-superfamily hydrolase, subfamily IIA  47.39 
 
 
261 aa  242  3.9999999999999997e-63  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1760  HAD family hydrolase  46.12 
 
 
269 aa  239  2e-62  Thermobifida fusca YX  Bacteria  normal  0.0798453  n/a   
 
 
-
 
NC_013739  Cwoe_0839  HAD-superfamily hydrolase, subfamily IIA  46.59 
 
 
263 aa  239  2e-62  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.680617 
 
 
-
 
NC_007777  Francci3_3889  HAD family hydrolase  45.42 
 
 
301 aa  239  2.9999999999999997e-62  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_2424  HAD-superfamily hydrolase, subfamily IIA  48.03 
 
 
257 aa  239  2.9999999999999997e-62  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.22995 
 
 
-
 
NC_013595  Sros_3221  HAD-superfamily hydrolase, subfamily IIA  48.22 
 
 
263 aa  239  2.9999999999999997e-62  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_0515  HAD family hydrolase  47.04 
 
 
276 aa  239  4e-62  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_34110  predicted sugar phosphatase of HAD superfamily  46.53 
 
 
264 aa  239  4e-62  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.800157  normal 
 
 
-
 
NC_014165  Tbis_1911  HAD-superfamily hydrolase  49 
 
 
258 aa  238  8e-62  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.104825 
 
 
-
 
NC_013441  Gbro_0615  HAD-superfamily hydrolase, subfamily IIA  46.12 
 
 
262 aa  236  2e-61  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2757  HAD-superfamily hydrolase, subfamily IIA  44.9 
 
 
266 aa  236  4e-61  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.13214  normal 
 
 
-
 
NC_011886  Achl_0656  HAD-superfamily hydrolase, subfamily IIA  45.85 
 
 
276 aa  235  5.0000000000000005e-61  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013093  Amir_0473  HAD-superfamily hydrolase, subfamily IIA  46.94 
 
 
262 aa  234  1.0000000000000001e-60  Actinosynnema mirum DSM 43827  Bacteria  normal  0.28866  n/a   
 
 
-
 
NC_013131  Caci_2194  HAD-superfamily hydrolase, subfamily IIA  46.18 
 
 
259 aa  233  2.0000000000000002e-60  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.48021  normal 
 
 
-
 
NC_008699  Noca_1242  HAD family hydrolase  44.18 
 
 
268 aa  233  2.0000000000000002e-60  Nocardioides sp. JS614  Bacteria  normal  0.319101  n/a   
 
 
-
 
NC_009664  Krad_4163  HAD-superfamily hydrolase, subfamily IIA  45.06 
 
 
259 aa  233  2.0000000000000002e-60  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.81021  normal 
 
 
-
 
NC_014150  Bmur_0572  HAD-superfamily hydrolase, subfamily IIA  45.82 
 
 
256 aa  232  4.0000000000000004e-60  Brachyspira murdochii DSM 12563  Bacteria  normal  0.641297  n/a   
 
 
-
 
NC_013235  Namu_4736  HAD-superfamily hydrolase, subfamily IIA  42.91 
 
 
275 aa  230  1e-59  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_6302  HAD-superfamily hydrolase subfamily IIA  46.99 
 
 
261 aa  229  3e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_0544  HAD-superfamily hydrolase, subfamily IIA  44.08 
 
 
261 aa  226  4e-58  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_0794  HAD family hydrolase  44.09 
 
 
257 aa  224  1e-57  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_15000  predicted sugar phosphatase of HAD superfamily  42.17 
 
 
276 aa  222  4.9999999999999996e-57  Brachybacterium faecium DSM 4810  Bacteria  normal  0.039649  n/a   
 
 
-
 
NC_009972  Haur_3370  HAD family hydrolase  41.6 
 
 
257 aa  208  8e-53  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.109866  n/a   
 
 
-
 
NC_013235  Namu_1914  HAD-superfamily hydrolase, subfamily IIA  44.76 
 
 
261 aa  204  1e-51  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00534341  hitchhiker  0.000838349 
 
 
-
 
NC_013061  Phep_0089  HAD-superfamily hydrolase, subfamily IIA  36.03 
 
 
257 aa  169  3e-41  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_008531  LEUM_0039  HAD family sugar phosphatase  37.14 
 
 
258 aa  159  4e-38  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1215  HAD-superfamily hydrolase, subfamily IIA  33.46 
 
 
265 aa  157  1e-37  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG0892  HAD superfamily hydrolase  33.47 
 
 
256 aa  155  6e-37  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.65538  n/a   
 
 
-
 
NC_009674  Bcer98_3557  HAD family hydrolase  36.99 
 
 
254 aa  153  2e-36  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4827  phosphatase  34 
 
 
254 aa  150  1e-35  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.00162438  n/a   
 
 
-
 
NC_007530  GBAA_5192  phosphatase  34 
 
 
254 aa  150  1e-35  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.183726  n/a   
 
 
-
 
NC_008532  STER_1214  HAD family sugar phosphatase  33.2 
 
 
257 aa  150  2e-35  Streptococcus thermophilus LMD-9  Bacteria  decreased coverage  0.000012407  n/a   
 
 
-
 
NC_003909  BCE_5096  phosphatase  33.6 
 
 
254 aa  149  3e-35  Bacillus cereus ATCC 10987  Bacteria  normal  0.344211  n/a   
 
 
-
 
NC_005957  BT9727_4668  4-nitrophenylphosphatase (p-nitrophenylphosphate phosphohydrolase)  33.6 
 
 
254 aa  149  3e-35  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.265618  n/a   
 
 
-
 
NC_006274  BCZK4685  4-nitrophenylphosphatase (p-nitrophenylphosphate phosphohydrolase)  33.6 
 
 
254 aa  149  3e-35  Bacillus cereus E33L  Bacteria  decreased coverage  0.00000109873  n/a   
 
 
-
 
NC_011658  BCAH187_A5101  phosphatase,haloacid dehalogenase family  33.6 
 
 
254 aa  149  3e-35  Bacillus cereus AH187  Bacteria  normal  0.348234  n/a   
 
 
-
 
NC_011773  BCAH820_5063  phosphatase,haloacid dehalogenase family  33.6 
 
 
254 aa  149  3e-35  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011725  BCB4264_A5102  phosphatase,haloacid dehalogenase family  32.66 
 
 
254 aa  149  5e-35  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0137  phosphatase,haloacid dehalogenase family  33.6 
 
 
254 aa  149  6e-35  Bacillus cereus G9842  Bacteria  normal  0.651243  normal 
 
 
-
 
NC_010184  BcerKBAB4_4780  HAD family hydrolase  34 
 
 
254 aa  148  7e-35  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_0563  HAD family hydrolase  34.44 
 
 
256 aa  147  2.0000000000000003e-34  Lactobacillus reuteri DSM 20016  Bacteria  normal  0.0984026  n/a   
 
 
-
 
NC_013525  Tter_1044  HAD-superfamily hydrolase, subfamily IIA  34.27 
 
 
266 aa  147  2.0000000000000003e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009718  Fnod_0233  HAD family hydrolase  32.64 
 
 
279 aa  140  3e-32  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_0444  HAD family sugar phosphatase  32.65 
 
 
260 aa  139  3.9999999999999997e-32  Lactobacillus gasseri ATCC 33323  Bacteria  decreased coverage  0.00000000163433  normal  0.182428 
 
 
-
 
NC_010627  Bphy_7446  HAD family hydrolase  33.33 
 
 
273 aa  138  1e-31  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_1083  HAD family hydrolase  30.8 
 
 
259 aa  136  2e-31  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1310  HAD family hydrolase  33.33 
 
 
265 aa  137  2e-31  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.300835 
 
 
-
 
NC_009486  Tpet_1037  HAD family hydrolase  30.8 
 
 
259 aa  137  2e-31  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2900  HAD-superfamily subfamily IIA hydrolase like protein  30.77 
 
 
257 aa  134  1.9999999999999998e-30  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_1254  HAD family sugar phosphatase  29.44 
 
 
257 aa  131  1.0000000000000001e-29  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.0106686  n/a   
 
 
-
 
NC_009632  SaurJH1_0947  HAD family hydrolase  32.1 
 
 
259 aa  128  7.000000000000001e-29  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0928  HAD family hydrolase  32.1 
 
 
259 aa  128  7.000000000000001e-29  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_013926  Aboo_1184  HAD-superfamily hydrolase, subfamily IIA  33.05 
 
 
255 aa  127  1.0000000000000001e-28  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_002976  SERP0515  HAD superfamily hydrolase  30.86 
 
 
259 aa  127  2.0000000000000002e-28  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0040  HAD family hydrolase  30.8 
 
 
267 aa  123  3e-27  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00579975  n/a   
 
 
-
 
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