More than 300 homologs were found in PanDaTox collection
for query gene Xcel_1618 on replicon NC_013530
Organism: Xylanimonas cellulosilytica DSM 15894



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  100 
 
 
220 aa  430  1e-119  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  60.27 
 
 
226 aa  250  1e-65  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  60.63 
 
 
222 aa  241  5e-63  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  57.99 
 
 
226 aa  234  1.0000000000000001e-60  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  58.8 
 
 
223 aa  233  1.0000000000000001e-60  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  57.6 
 
 
221 aa  233  1.0000000000000001e-60  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  57.01 
 
 
221 aa  232  3e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  57.85 
 
 
232 aa  229  2e-59  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  59.28 
 
 
222 aa  229  2e-59  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  55.2 
 
 
225 aa  230  2e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  55.76 
 
 
222 aa  228  4e-59  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  57.8 
 
 
224 aa  228  5e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  56.16 
 
 
226 aa  228  6e-59  Frankia sp. EAN1pec  Bacteria  normal  normal  0.554715 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  56.56 
 
 
223 aa  226  2e-58  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  56.42 
 
 
219 aa  226  3e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  57.67 
 
 
217 aa  225  4e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  53.46 
 
 
224 aa  225  4e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  57.48 
 
 
214 aa  224  9e-58  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  57.01 
 
 
225 aa  223  2e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  55.61 
 
 
228 aa  221  4.9999999999999996e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  55.22 
 
 
244 aa  221  6e-57  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  57.14 
 
 
226 aa  220  9.999999999999999e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  55.2 
 
 
215 aa  220  9.999999999999999e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  53.39 
 
 
230 aa  220  1.9999999999999999e-56  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_37860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  57.92 
 
 
221 aa  219  1.9999999999999999e-56  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  56.94 
 
 
226 aa  219  1.9999999999999999e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  55.2 
 
 
228 aa  218  7e-56  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  53.42 
 
 
224 aa  217  1e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  54.38 
 
 
261 aa  216  2e-55  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  53.92 
 
 
233 aa  216  2.9999999999999998e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  56.11 
 
 
224 aa  215  4e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  54.02 
 
 
229 aa  213  1.9999999999999998e-54  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5265  two component transcriptional regulator, LuxR family  54.38 
 
 
218 aa  213  1.9999999999999998e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  54.55 
 
 
221 aa  212  2.9999999999999995e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  53.92 
 
 
221 aa  211  5.999999999999999e-54  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_007777  Francci3_0303  two component LuxR family transcriptional regulator  56.28 
 
 
214 aa  209  2e-53  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  53.7 
 
 
247 aa  210  2e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  54.09 
 
 
226 aa  209  3e-53  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  52.31 
 
 
224 aa  209  4e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  52.97 
 
 
222 aa  208  6e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  53.36 
 
 
236 aa  207  1e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  53.15 
 
 
225 aa  206  2e-52  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_009921  Franean1_6511  two component LuxR family transcriptional regulator  54.21 
 
 
215 aa  206  3e-52  Frankia sp. EAN1pec  Bacteria  normal  normal  0.100644 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  52.27 
 
 
226 aa  204  8e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  53.85 
 
 
227 aa  204  8e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  52.09 
 
 
219 aa  203  1e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  52.47 
 
 
241 aa  204  1e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  53.39 
 
 
225 aa  202  2e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  54.09 
 
 
220 aa  203  2e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  51.36 
 
 
239 aa  202  3e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  54.59 
 
 
217 aa  202  4e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  50.92 
 
 
221 aa  202  4e-51  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  54.13 
 
 
215 aa  202  4e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  53.92 
 
 
216 aa  202  5e-51  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  49.55 
 
 
218 aa  201  5e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  50.89 
 
 
220 aa  201  5e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  52.94 
 
 
226 aa  201  6e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  53.24 
 
 
225 aa  201  7e-51  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  51.38 
 
 
220 aa  200  9.999999999999999e-51  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  52.09 
 
 
234 aa  200  9.999999999999999e-51  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.46 
 
 
229 aa  199  1.9999999999999998e-50  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  52.05 
 
 
219 aa  199  1.9999999999999998e-50  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  53.92 
 
 
217 aa  199  1.9999999999999998e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  50.92 
 
 
218 aa  199  3e-50  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  51.87 
 
 
219 aa  198  3.9999999999999996e-50  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  51.6 
 
 
220 aa  199  3.9999999999999996e-50  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.55 
 
 
236 aa  199  3.9999999999999996e-50  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  52.31 
 
 
217 aa  198  6e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  49.55 
 
 
223 aa  198  7e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  51.83 
 
 
218 aa  197  7e-50  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  50 
 
 
222 aa  198  7e-50  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.61 
 
 
225 aa  197  1.0000000000000001e-49  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  51.13 
 
 
225 aa  197  1.0000000000000001e-49  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  52.73 
 
 
225 aa  197  1.0000000000000001e-49  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  52.8 
 
 
224 aa  197  1.0000000000000001e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  50 
 
 
228 aa  196  2.0000000000000003e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  49.36 
 
 
231 aa  196  2.0000000000000003e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  50.47 
 
 
219 aa  196  2.0000000000000003e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013235  Namu_0608  two component transcriptional regulator, LuxR family  51.58 
 
 
228 aa  195  4.0000000000000005e-49  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  51.38 
 
 
226 aa  194  1e-48  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  49.77 
 
 
230 aa  193  1e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  47.73 
 
 
239 aa  194  1e-48  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  46.22 
 
 
233 aa  192  2e-48  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  52.73 
 
 
225 aa  193  2e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  52.29 
 
 
225 aa  193  2e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  50.46 
 
 
225 aa  193  2e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  50.23 
 
 
221 aa  192  3e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  49.77 
 
 
225 aa  192  3e-48  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  39.13 
 
 
261 aa  192  3e-48  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  51.58 
 
 
224 aa  191  5e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  51.85 
 
 
241 aa  192  5e-48  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  49.78 
 
 
227 aa  190  1e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6705  two component transcriptional regulator, LuxR family  45.88 
 
 
258 aa  190  1e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.318103  normal  0.0731204 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  49.77 
 
 
220 aa  189  2e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6211  response regulator receiver protein  51.16 
 
 
239 aa  189  2e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.377169 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  50 
 
 
214 aa  189  2e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013947  Snas_1509  two component transcriptional regulator, LuxR family  48 
 
 
221 aa  190  2e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.198395  normal  0.0597777 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  47.69 
 
 
211 aa  189  2e-47  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  49.55 
 
 
223 aa  190  2e-47  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  51.12 
 
 
228 aa  190  2e-47  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
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