167 homologs were found in PanDaTox collection
for query gene Xaut_0048 on replicon NC_009720
Organism: Xanthobacter autotrophicus Py2



Page 1 of 2    << first  < prev  1  2    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009720  Xaut_0048  DNA binding domain-containing protein  100 
 
 
296 aa  586  1e-166  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.774788 
 
 
-
 
NC_011666  Msil_0333  DNA binding domain protein, excisionase family  63.33 
 
 
296 aa  357  1.9999999999999998e-97  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0102766 
 
 
-
 
NC_008043  TM1040_3033  excisionase/Xis, DNA-binding  46.64 
 
 
304 aa  237  2e-61  Ruegeria sp. TM1040  Bacteria  normal  0.627333  normal 
 
 
-
 
NC_009952  Dshi_0629  periplasmic substrate-binding protein  47.77 
 
 
290 aa  231  1e-59  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_2745  DNA binding domain-containing protein  44.59 
 
 
300 aa  217  1e-55  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_2438  DNA binding domain-containing protein  37.97 
 
 
291 aa  166  5e-40  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_5502  DNA binding domain-containing protein  39.12 
 
 
291 aa  162  4.0000000000000004e-39  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0194  DNA binding domain-containing protein  36.75 
 
 
303 aa  132  5e-30  Desulfovibrio vulgaris DP4  Bacteria  normal  0.741486  normal 
 
 
-
 
NC_009943  Dole_0369  DNA binding domain-containing protein  31.92 
 
 
308 aa  131  2.0000000000000002e-29  Desulfococcus oleovorans Hxd3  Bacteria  decreased coverage  0.0000403691  n/a   
 
 
-
 
NC_007498  Pcar_0674  molybdate-binding domain-containing protein  31.53 
 
 
304 aa  127  2.0000000000000002e-28  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  1.95042e-17  n/a   
 
 
-
 
NC_007519  Dde_0119  excisionase/Xis, DNA-binding  33.22 
 
 
309 aa  120  1.9999999999999998e-26  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1908  excisionase/Xis, DNA-binding  30.23 
 
 
307 aa  119  7.999999999999999e-26  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2264  DNA binding domain protein, excisionase family  34.24 
 
 
328 aa  115  7.999999999999999e-25  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008700  Sama_3620  hypothetical protein  29.77 
 
 
302 aa  115  1.0000000000000001e-24  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_4144  DNA binding domain-containing protein  29.03 
 
 
301 aa  113  4.0000000000000004e-24  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4502  hypothetical protein  28.43 
 
 
301 aa  106  4e-22  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011772  BCG9842_B5098  periplasmic molybdate-binding protein  24.25 
 
 
306 aa  104  2e-21  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_0187  DNA binding domain-containing protein  24.42 
 
 
306 aa  104  2e-21  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0615  molybdenum cofactor synthesis domain-containing protein  31.8 
 
 
651 aa  104  2e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3784  DNA binding domain-containing protein  28.09 
 
 
301 aa  103  3e-21  Shewanella sp. MR-7  Bacteria  unclonable  0.00000134193  normal  0.867769 
 
 
-
 
NC_010506  Swoo_4820  DNA binding domain-containing protein  26.77 
 
 
301 aa  103  4e-21  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_4129  DNA binding domain-containing protein  28.09 
 
 
301 aa  103  4e-21  Shewanella baltica OS155  Bacteria  hitchhiker  0.000950861  n/a   
 
 
-
 
NC_011663  Sbal223_0240  DNA binding domain protein, excisionase family  28.09 
 
 
301 aa  103  4e-21  Shewanella baltica OS223  Bacteria  normal  0.256207  hitchhiker  0.000155098 
 
 
-
 
NC_009438  Sputcn32_0344  DNA binding domain-containing protein  27.76 
 
 
301 aa  103  4e-21  Shewanella putrefaciens CN-32  Bacteria  decreased coverage  0.0000000433328  n/a   
 
 
-
 
NC_009665  Shew185_4099  DNA binding domain-containing protein  28.09 
 
 
301 aa  103  4e-21  Shewanella baltica OS185  Bacteria  hitchhiker  0.00105408  n/a   
 
 
-
 
NC_013411  GYMC61_0812  DNA binding domain protein, excisionase family  27.52 
 
 
308 aa  103  4e-21  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_4217  DNA binding domain-containing protein  28.09 
 
 
301 aa  103  4e-21  Shewanella baltica OS195  Bacteria  hitchhiker  0.00203903  normal  0.426085 
 
 
-
 
NC_008321  Shewmr4_3713  DNA binding domain-containing protein  28.09 
 
 
301 aa  103  5e-21  Shewanella sp. MR-4  Bacteria  normal  0.017295  normal  0.392744 
 
 
-
 
NC_009831  Ssed_4428  DNA binding domain-containing protein  26.49 
 
 
301 aa  102  6e-21  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A0229  putative molybdopterin biosynthesis protein  23.91 
 
 
306 aa  102  7e-21  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3909  DNA binding domain-containing protein  27.42 
 
 
301 aa  102  8e-21  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00007474  normal 
 
 
-
 
NC_009943  Dole_0684  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  30.07 
 
 
648 aa  102  1e-20  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_24590  molybdenum cofactor synthesis domain protein  32.27 
 
 
645 aa  101  2e-20  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_3228  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  32.75 
 
 
666 aa  100  3e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4561  DNA binding domain protein, excisionase family  26.38 
 
 
335 aa  99.8  5e-20  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000373649  n/a   
 
 
-
 
NC_005957  BT9727_0190  molybdate-binding protein  23.92 
 
 
315 aa  99  9e-20  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0223  molybdopterin biosynthesis protein, putative  23.59 
 
 
315 aa  97.8  2e-19  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_1158  DNA binding domain protein, excisionase family  25.4 
 
 
320 aa  97.8  2e-19  Sebaldella termitidis ATCC 33386  Bacteria  unclonable  0.000000000597249  n/a   
 
 
-
 
NC_008346  Swol_0801  molybdenum cofactor biosynthesis protein  27.62 
 
 
639 aa  98.2  2e-19  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0201  DNA binding domain-containing protein  24.33 
 
 
305 aa  97.1  3e-19  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_1821  putative molybdate-binding protein  27.27 
 
 
294 aa  96.3  6e-19  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1453  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  33.19 
 
 
652 aa  95.9  7e-19  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0052  DNA binding domain-containing protein  27.69 
 
 
301 aa  95.9  7e-19  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_1894  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  30.87 
 
 
640 aa  94.7  1e-18  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.116253  n/a   
 
 
-
 
NC_013517  Sterm_1676  molybdenum cofactor synthesis domain protein  26.52 
 
 
633 aa  95.5  1e-18  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0246  putative molybdopterin biosynthesis protein  22.92 
 
 
306 aa  94.7  2e-18  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_0154  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  28.94 
 
 
627 aa  94.7  2e-18  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.0854923 
 
 
-
 
NC_006274  BCZK0194  molybdate-binding protein  22.92 
 
 
315 aa  94  3e-18  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_0664  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  26.99 
 
 
621 aa  93.6  3e-18  Methanospirillum hungatei JF-1  Archaea  normal  0.509419  normal 
 
 
-
 
NC_008346  Swol_1557  molybdate-binding protein  27.71 
 
 
317 aa  94  3e-18  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_3717  DNA binding domain protein, excisionase family  33.88 
 
 
307 aa  94  3e-18  Thauera sp. MZ1T  Bacteria  normal  0.222458  n/a   
 
 
-
 
NC_005945  BAS0204  molybdopterin biosynthesis protein  23.26 
 
 
306 aa  93.6  4e-18  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0205  molybdopterin biosynthesis protein  23.26 
 
 
306 aa  93.6  4e-18  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0222  putative molybdopterin biosynthesis protein  23.26 
 
 
306 aa  93.6  4e-18  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007948  Bpro_1757  molybdate metabolism transcriptional regulator  32.58 
 
 
371 aa  92.8  7e-18  Polaromonas sp. JS666  Bacteria  normal  normal  0.175288 
 
 
-
 
NC_009051  Memar_0405  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  27.17 
 
 
636 aa  90.9  2e-17  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_010718  Nther_0447  molybdenum cofactor synthesis domain protein  28.21 
 
 
642 aa  91.7  2e-17  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.583292  normal 
 
 
-
 
NC_010003  Pmob_0374  molybdenum cofactor synthesis domain-containing protein  30.26 
 
 
632 aa  91.3  2e-17  Petrotoga mobilis SJ95  Bacteria  normal  0.858069  n/a   
 
 
-
 
NC_007413  Ava_4042  molybdate metabolism transcriptional regulator  31.16 
 
 
376 aa  90.1  4e-17  Anabaena variabilis ATCC 29413  Bacteria  normal  0.805509  normal  0.419577 
 
 
-
 
NC_008751  Dvul_0382  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  29.13 
 
 
650 aa  89.7  5e-17  Desulfovibrio vulgaris DP4  Bacteria  normal  0.690457  normal 
 
 
-
 
NC_009253  Dred_2878  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  32.31 
 
 
644 aa  89.7  6e-17  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_1508  molybdate metabolism transcriptional regulator  33.48 
 
 
375 aa  89.4  7e-17  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1164  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  30.08 
 
 
655 aa  88.6  1e-16  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.811833  hitchhiker  0.00369459 
 
 
-
 
NC_012793  GWCH70_1737  DNA binding domain protein, excisionase family  25 
 
 
315 aa  88.2  2e-16  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2110  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  29.69 
 
 
649 aa  87  3e-16  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.0934426 
 
 
-
 
NC_013216  Dtox_0019  DNA binding domain protein, excisionase family  25.31 
 
 
326 aa  87  4e-16  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_1772  molybdenum cofactor synthesis domain protein  30.47 
 
 
649 aa  86.7  4e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1861  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  31.9 
 
 
647 aa  85.5  0.000000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.72567 
 
 
-
 
NC_010320  Teth514_1391  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  25.55 
 
 
635 aa  84.3  0.000000000000002  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_0346  transcriptional regulator of molybdate metabolism, XRE family  27.04 
 
 
377 aa  84  0.000000000000003  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_003295  RSc2092  hypothetical protein  30.63 
 
 
366 aa  83.2  0.000000000000005  Ralstonia solanacearum GMI1000  Bacteria  normal  0.306178  normal 
 
 
-
 
NC_010682  Rpic_2243  transcriptional regulator of molybdate metabolism, LysR family  29.73 
 
 
366 aa  82.4  0.000000000000008  Ralstonia pickettii 12J  Bacteria  normal  0.963081  normal 
 
 
-
 
NC_012856  Rpic12D_1919  transcriptional regulator of molybdate metabolism, LysR family  29.73 
 
 
366 aa  82.4  0.000000000000008  Ralstonia pickettii 12D  Bacteria  normal  0.360263  normal  0.895882 
 
 
-
 
NC_013522  Taci_0881  molybdenum cofactor synthesis domain protein  28.24 
 
 
624 aa  82  0.00000000000001  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.542033  n/a   
 
 
-
 
NC_011145  AnaeK_1059  DNA binding domain protein, excisionase family  31.25 
 
 
292 aa  82  0.00000000000001  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1001  DNA-binding excisionase/Xis  31.56 
 
 
290 aa  81.6  0.00000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A3707  periplasmic-binding protein  31.65 
 
 
361 aa  81.3  0.00000000000002  Methylibium petroleiphilum PM1  Bacteria  normal  0.337443  normal  0.775197 
 
 
-
 
NC_007347  Reut_A0616  molybdate metabolism transcriptional regulator  32.18 
 
 
365 aa  80.1  0.00000000000004  Ralstonia eutropha JMP134  Bacteria  normal  0.0588457  n/a   
 
 
-
 
NC_008825  Mpe_A0339  molybdate metabolism transcriptional regulator  26.73 
 
 
358 aa  79.3  0.00000000000007  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2870  molybdate metabolism transcriptional regulator  30 
 
 
372 aa  78.6  0.0000000000001  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1797  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  30.09 
 
 
655 aa  79  0.0000000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.984095 
 
 
-
 
NC_009135  MmarC5_1062  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  22.45 
 
 
616 aa  78.6  0.0000000000001  Methanococcus maripaludis C5  Archaea  normal  0.92784  n/a   
 
 
-
 
NC_009637  MmarC7_1564  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  23.47 
 
 
616 aa  78.2  0.0000000000001  Methanococcus maripaludis C7  Archaea  normal  normal  0.292001 
 
 
-
 
NC_011891  A2cp1_1062  DNA binding domain protein, excisionase family  29.87 
 
 
291 aa  78.2  0.0000000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0896  molybdate metabolism transcriptional regulator  29.41 
 
 
365 aa  77.4  0.0000000000003  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009975  MmarC6_0347  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  22.96 
 
 
616 aa  77  0.0000000000004  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_007973  Rmet_0552  molybdate metabolism transcriptional regulator  31.58 
 
 
373 aa  76.3  0.0000000000005  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.269597 
 
 
-
 
NC_010084  Bmul_2363  molybdate metabolism transcriptional regulator  31.63 
 
 
368 aa  75.9  0.0000000000008  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_3952  DNA binding domain-containing protein  24.68 
 
 
317 aa  75.1  0.000000000001  Xanthobacter autotrophicus Py2  Bacteria  normal  0.581977  normal 
 
 
-
 
NC_007413  Ava_4055  molybdate metabolism transcriptional regulator  27.78 
 
 
377 aa  73.9  0.000000000003  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.00182658  normal  0.26319 
 
 
-
 
NC_009439  Pmen_0386  molybdate metabolism transcriptional regulator  31.96 
 
 
362 aa  73.9  0.000000000003  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_3853  XRE family molybdate metabolism transcriptional regulator  27.42 
 
 
377 aa  73.2  0.000000000005  'Nostoc azollae' 0708  Bacteria  normal  0.593506  n/a   
 
 
-
 
NC_010524  Lcho_1822  molybdate metabolism transcriptional regulator  29.41 
 
 
386 aa  72.8  0.000000000006  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00250223 
 
 
-
 
NC_010525  Tneu_0843  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  33.81 
 
 
637 aa  72.8  0.000000000007  Thermoproteus neutrophilus V24Sta  Archaea  normal  0.505015  normal 
 
 
-
 
NC_009635  Maeo_1124  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  21.46 
 
 
668 aa  72.4  0.000000000008  Methanococcus aeolicus Nankai-3  Archaea  normal  0.352674  n/a   
 
 
-
 
NC_008390  Bamb_0898  molybdate metabolism transcriptional regulator  30.69 
 
 
368 aa  72  0.00000000001  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0910  molybdate metabolism transcriptional regulator  30.69 
 
 
368 aa  72  0.00000000001  Burkholderia ambifaria MC40-6  Bacteria  normal  0.527444  normal  0.0178578 
 
 
-
 
NC_007510  Bcep18194_A4147  molybdate metabolism transcriptional regulator  31.19 
 
 
368 aa  70.9  0.00000000002  Burkholderia sp. 383  Bacteria  normal  0.70321  normal 
 
 
-
 
NC_008060  Bcen_0555  molybdate metabolism transcriptional regulator  30.81 
 
 
368 aa  71.2  0.00000000002  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.601772  n/a   
 
 
-
 
NC_008542  Bcen2424_1034  molybdate metabolism transcriptional regulator  30.81 
 
 
368 aa  71.2  0.00000000002  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 2    << first  < prev  1  2    next >  last >>