14 homologs were found in PanDaTox collection
for query gene Vapar_4799 on replicon NC_012791
Organism: Variovorax paradoxus S110



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012791  Vapar_4799  hypothetical protein  100 
 
 		 177 aa  335  1.9999999999999998e-91  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_0536  poly(hydroxyalkanoate) granule-associated protein  48.94 
 
 		 157 aa  49.3  0.00003  Acidovorax sp. JS42  Bacteria  normal  0.326611  normal  0.0874326 
 
 
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NC_011992  Dtpsy_0552  poly(hydroxyalkanoate) granule-associated protein  48.94 
 
 		 157 aa  49.3  0.00003  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_010501  PputW619_0457  poly(hydroxyalkanoate) granule-associated protein  33.33 
 
 		 254 aa  45.1  0.0006  Pseudomonas putida W619  Bacteria  normal  0.868468  normal  1 
 
 
-
 
NC_002947  PP_5007  poly(hydroxyalkanoate) granule-associated protein  32.05 
 
 		 261 aa  43.5  0.001  Pseudomonas putida KT2440  Bacteria  normal  0.508327  normal  1 
 
 
-
 
NC_004578  PSPTO_5147  polyhydroxyalkanoate granule-associated protein PhaF  38.89 
 
 		 257 aa  43.5  0.001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_009512  Pput_4881  poly(hydroxyalkanoate) granule-associated protein  32.05 
 
 		 261 aa  43.9  0.001  Pseudomonas putida F1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007492  Pfl01_0389  Poly granule associated  44.26 
 
 		 140 aa  42.7  0.003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.327978 
 
 
-
 
NC_008781  Pnap_3495  poly(hydroxyalkanoate) granule-associated protein  47.62 
 
 		 194 aa  42.4  0.004  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  0.827909 
 
 
-
 
NC_010322  PputGB1_5057  poly(hydroxyalkanoate) granule-associated protein  30.77 
 
 		 258 aa  42.4  0.004  Pseudomonas putida GB-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010513  Xfasm12_0604  poly(hydroxyalcanoate) granule associated protein  37.78 
 
 		 168 aa  42  0.004  Xylella fastidiosa M12  Bacteria  normal  1  n/a   
 
 
-
 
NC_010577  XfasM23_0559  poly(hydroxyalkanoate) granule-associated protein  37.78 
 
 		 168 aa  42  0.005  Xylella fastidiosa M23  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_3527  poly granule associated  41.3 
 
 		 200 aa  41.6  0.006  Rhodoferax ferrireducens T118  Bacteria  normal  0.219058  n/a   
 
 
-
 
NC_012791  Vapar_0350  poly(hydroxyalkanoate) granule-associated protein  41.82 
 
 		 167 aa  41.6  0.006  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
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