More than 300 homologs were found in PanDaTox collection
for query gene Vapar_0155 on replicon NC_012791
Organism: Variovorax paradoxus S110



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012791  Vapar_0155  binding-protein-dependent transport systems inner membrane component  100 
 
 
292 aa  561  1.0000000000000001e-159  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_0146  binding-protein-dependent transport systems inner membrane component  81.99 
 
 
296 aa  426  1e-118  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.159688 
 
 
-
 
NC_008752  Aave_2968  binding-protein-dependent transport systems inner membrane component  82.31 
 
 
289 aa  421  1e-117  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0761961  normal 
 
 
-
 
NC_007347  Reut_A2719  binding-protein dependent transport system inner membrane protein  77.5 
 
 
284 aa  417  1e-116  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_2858  binding-protein-dependent transport systems inner membrane component  78.65 
 
 
291 aa  415  9.999999999999999e-116  Cupriavidus metallidurans CH34  Bacteria  normal  0.582448  normal 
 
 
-
 
NC_007948  Bpro_1046  binding-protein-dependent transport systems inner membrane component  83.21 
 
 
282 aa  413  1e-114  Polaromonas sp. JS666  Bacteria  normal  0.12004  normal  0.278615 
 
 
-
 
NC_008786  Veis_3642  binding-protein-dependent transport systems inner membrane component  79.62 
 
 
275 aa  410  1e-113  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.142025  normal 
 
 
-
 
NC_011894  Mnod_0326  binding-protein-dependent transport systems inner membrane component  77.17 
 
 
257 aa  385  1e-106  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.369486  n/a   
 
 
-
 
NC_010511  M446_2276  binding-protein-dependent transport systems inner membrane component  77.78 
 
 
257 aa  384  1e-105  Methylobacterium sp. 4-46  Bacteria  normal  0.722283  normal  0.0991744 
 
 
-
 
NC_009485  BBta_6456  ABC transporter permease  76.59 
 
 
258 aa  358  7e-98  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.405099  normal 
 
 
-
 
NC_012880  Dd703_2644  binding-protein-dependent transport systems inner membrane component  76.86 
 
 
282 aa  353  2e-96  Dickeya dadantii Ech703  Bacteria  normal  0.285231  n/a   
 
 
-
 
NC_009667  Oant_1429  binding-protein-dependent transport systems inner membrane component  70.87 
 
 
257 aa  328  6e-89  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.214609  n/a   
 
 
-
 
NC_007644  Moth_0466  binding-protein dependent transport system inner membrane protein  53.3 
 
 
262 aa  211  1e-53  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_2559  binding-protein-dependent transport systems inner membrane component  45.19 
 
 
283 aa  210  2e-53  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_3788  binding-protein-dependent transport systems inner membrane component  44.16 
 
 
276 aa  201  9.999999999999999e-51  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.374556  normal 
 
 
-
 
NC_008781  Pnap_0040  binding-protein-dependent transport systems inner membrane component  43.42 
 
 
259 aa  194  1e-48  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.832577  normal  0.34867 
 
 
-
 
NC_011368  Rleg2_5005  binding-protein-dependent transport systems inner membrane component  39.46 
 
 
267 aa  190  2.9999999999999997e-47  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4930  binding-protein dependent transport system inner membrane protein  40.83 
 
 
267 aa  183  4.0000000000000006e-45  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_3255  binding-protein-dependent transport systems inner membrane component  37.68 
 
 
294 aa  168  9e-41  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.106321 
 
 
-
 
NC_007348  Reut_B4887  binding-protein dependent transport system inner membrane protein  38.82 
 
 
296 aa  165  6.9999999999999995e-40  Ralstonia eutropha JMP134  Bacteria  normal  0.0123695  n/a   
 
 
-
 
NC_007516  Syncc9605_1078  ABC transporter, nitrate-like  39.48 
 
 
275 aa  162  5.0000000000000005e-39  Synechococcus sp. CC9605  Bacteria  normal  0.193306  normal 
 
 
-
 
NC_013422  Hneap_0791  binding-protein-dependent transport systems inner membrane component  41.67 
 
 
320 aa  155  6e-37  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1646  binding-protein-dependent transport systems inner membrane component  42.92 
 
 
259 aa  154  1e-36  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0058  binding-protein-dependent transport systems inner membrane component  35.34 
 
 
275 aa  154  2e-36  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_010676  Bphyt_5226  binding-protein-dependent transport systems inner membrane component  39.74 
 
 
323 aa  152  5e-36  Burkholderia phytofirmans PsJN  Bacteria  normal  0.226274  normal 
 
 
-
 
NC_007952  Bxe_B1386  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  38.7 
 
 
323 aa  149  5e-35  Burkholderia xenovorans LB400  Bacteria  normal  0.173943  normal  0.101646 
 
 
-
 
NC_008062  Bcen_5556  binding-protein-dependent transport systems inner membrane component  37.95 
 
 
324 aa  146  4.0000000000000006e-34  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0488095  n/a   
 
 
-
 
NC_008544  Bcen2424_5921  binding-protein-dependent transport systems inner membrane component  37.95 
 
 
324 aa  146  4.0000000000000006e-34  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3729  binding-protein-dependent transport systems inner membrane component  41.62 
 
 
353 aa  146  5e-34  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.19574 
 
 
-
 
NC_010512  Bcenmc03_6428  binding-protein-dependent transport systems inner membrane component  42.39 
 
 
324 aa  146  5e-34  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_3907  binding-protein-dependent transport systems inner membrane component  41.62 
 
 
357 aa  145  6e-34  Methylobacterium populi BJ001  Bacteria  normal  0.0334046  normal  0.137928 
 
 
-
 
NC_011757  Mchl_4024  binding-protein-dependent transport systems inner membrane component  41.08 
 
 
353 aa  145  1e-33  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_3082  binding-protein-dependent transport systems inner membrane component  47.28 
 
 
319 aa  145  1e-33  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_1108  binding-protein-dependent transport systems inner membrane component  33.76 
 
 
255 aa  144  1e-33  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.135552 
 
 
-
 
NC_009253  Dred_1575  binding-protein-dependent transport systems inner membrane component  34.17 
 
 
254 aa  143  4e-33  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0747147  n/a   
 
 
-
 
NC_004578  PSPTO_5321  taurine ABC transporter, permease protein  32.09 
 
 
285 aa  139  3.9999999999999997e-32  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1858  binding-protein-dependent transport systems inner membrane component  43.09 
 
 
321 aa  139  3.9999999999999997e-32  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_0049  ABC taurine transporter, binding protein inner membrane component  33.07 
 
 
330 aa  138  1e-31  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.0656508 
 
 
-
 
NC_007298  Daro_0080  binding-protein dependent transport system inner membrane protein  43.01 
 
 
318 aa  137  2e-31  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0254  binding-protein dependent transport system inner membrane protein  31.93 
 
 
279 aa  137  2e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.57663 
 
 
-
 
NC_010682  Rpic_2883  binding-protein-dependent transport systems inner membrane component  34.19 
 
 
289 aa  136  3.0000000000000003e-31  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4641  binding-protein-dependent transport systems inner membrane component  33.47 
 
 
277 aa  136  4e-31  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750363  n/a   
 
 
-
 
NC_007520  Tcr_1787  binding-protein dependent transport system inner membrane protein  37.96 
 
 
326 aa  135  8e-31  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_0231  binding-protein-dependent transport systems inner membrane component  31.54 
 
 
279 aa  134  1.9999999999999998e-30  Pseudomonas putida KT2440  Bacteria  normal  0.33405  hitchhiker  0.000710194 
 
 
-
 
NC_007953  Bxe_C0085  taurine ABC transporter inner membrane protein  33.46 
 
 
283 aa  133  3e-30  Burkholderia xenovorans LB400  Bacteria  normal  0.664827  normal  0.135193 
 
 
-
 
NC_012856  Rpic12D_2477  binding-protein-dependent transport systems inner membrane component  33.47 
 
 
289 aa  134  3e-30  Ralstonia pickettii 12D  Bacteria  normal  0.0948255  normal 
 
 
-
 
NC_004311  BRA1188  taurine ABC transporter, permease protein  36.45 
 
 
250 aa  133  3.9999999999999996e-30  Brucella suis 1330  Bacteria  normal  0.0612406  n/a   
 
 
-
 
NC_014150  Bmur_0403  binding-protein-dependent transport systems inner membrane component  30.4 
 
 
256 aa  133  3.9999999999999996e-30  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_1763  binding-protein-dependent transport systems inner membrane component  34.15 
 
 
282 aa  132  5e-30  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009635  Maeo_0992  binding-protein-dependent transport systems inner membrane component  35.75 
 
 
254 aa  132  9e-30  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_010625  Bphy_6082  binding-protein-dependent transport systems inner membrane component  32.62 
 
 
296 aa  131  1.0000000000000001e-29  Burkholderia phymatum STM815  Bacteria  normal  normal  0.201741 
 
 
-
 
NC_009512  Pput_0246  binding-protein-dependent transport systems inner membrane component  31 
 
 
279 aa  131  1.0000000000000001e-29  Pseudomonas putida F1  Bacteria  normal  0.0570948  normal  0.0921514 
 
 
-
 
NC_007778  RPB_4060  binding-protein dependent transport system inner membrane protein  32.92 
 
 
256 aa  131  1.0000000000000001e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4981  binding-protein-dependent transport systems inner membrane component  30.34 
 
 
279 aa  131  2.0000000000000002e-29  Pseudomonas putida W619  Bacteria  normal  normal  0.588836 
 
 
-
 
NC_009485  BBta_3299  putative sulfonate ABC transporter, permease protein  29.31 
 
 
286 aa  130  3e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.201269  normal  0.262094 
 
 
-
 
NC_013521  Sked_16930  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  33.11 
 
 
322 aa  129  6e-29  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.327  normal  0.410158 
 
 
-
 
NC_010322  PputGB1_0255  binding-protein-dependent transport systems inner membrane component  30.51 
 
 
279 aa  129  8.000000000000001e-29  Pseudomonas putida GB-1  Bacteria  normal  0.796344  normal 
 
 
-
 
NC_008752  Aave_0047  binding-protein-dependent transport systems inner membrane component  34.35 
 
 
306 aa  129  8.000000000000001e-29  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_2979  binding-protein-dependent transport systems inner membrane component  31.23 
 
 
296 aa  128  9.000000000000001e-29  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0421  binding-protein-dependent transport systems inner membrane component  35.04 
 
 
321 aa  127  2.0000000000000002e-28  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.905374 
 
 
-
 
NC_007510  Bcep18194_A6225  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  34.53 
 
 
320 aa  127  2.0000000000000002e-28  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0509  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
289 aa  127  2.0000000000000002e-28  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.085274 
 
 
-
 
NC_007951  Bxe_A4207  ABC taurine transporter, inner membrane subunit  33.76 
 
 
289 aa  127  2.0000000000000002e-28  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_1575  binding-protein-dependent transport systems inner membrane component  31.11 
 
 
266 aa  127  3e-28  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0464  binding-protein-dependent transport systems inner membrane component  34.05 
 
 
288 aa  126  5e-28  Methylobacterium sp. 4-46  Bacteria  normal  0.349721  hitchhiker  0.00645779 
 
 
-
 
NC_012793  GWCH70_2621  binding-protein-dependent transport systems inner membrane component  32.03 
 
 
281 aa  126  5e-28  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00000218671  n/a   
 
 
-
 
NC_013595  Sros_3065  binding-protein-dependent transport systems inner membrane component  36.15 
 
 
280 aa  125  8.000000000000001e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.228654 
 
 
-
 
NC_008688  Pden_5005  binding-protein-dependent transport systems inner membrane component  31.15 
 
 
289 aa  125  9e-28  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_2304  binding-protein-dependent transport systems inner membrane component  32.05 
 
 
278 aa  125  9e-28  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.37818 
 
 
-
 
NC_009720  Xaut_3459  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
283 aa  124  1e-27  Xanthobacter autotrophicus Py2  Bacteria  normal  0.703735  normal 
 
 
-
 
NC_009636  Smed_1127  binding-protein-dependent transport systems inner membrane component  32.22 
 
 
267 aa  125  1e-27  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1488  binding-protein dependent transport system inner membrane protein  31.49 
 
 
280 aa  125  1e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.106569  normal  0.790334 
 
 
-
 
NC_007951  Bxe_A2492  ABC aliphatic sulfonates transporter, innermembrane subunit  31.62 
 
 
280 aa  124  2e-27  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.773133 
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  32.81 
 
 
273 aa  124  2e-27  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  32.81 
 
 
273 aa  124  2e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  31.87 
 
 
273 aa  123  3e-27  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_008687  Pden_4108  binding-protein-dependent transport systems inner membrane component  31.62 
 
 
283 aa  123  3e-27  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009634  Mevan_0512  binding-protein-dependent transport systems inner membrane component  33.95 
 
 
253 aa  123  4e-27  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_010581  Bind_0676  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
279 aa  123  4e-27  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.30868 
 
 
-
 
NC_010676  Bphyt_4371  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
306 aa  123  4e-27  Burkholderia phytofirmans PsJN  Bacteria  normal  0.17867  normal 
 
 
-
 
NC_010681  Bphyt_1745  binding-protein-dependent transport systems inner membrane component  31.62 
 
 
280 aa  122  5e-27  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1402  binding-protein-dependent transport systems inner membrane component  34.68 
 
 
257 aa  122  6e-27  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3464  binding-protein-dependent transport systems inner membrane component  30.77 
 
 
294 aa  122  6e-27  Xanthobacter autotrophicus Py2  Bacteria  normal  0.136656  normal 
 
 
-
 
NC_007777  Francci3_0250  binding-protein-dependent transport systems inner membrane component  30.7 
 
 
280 aa  122  7e-27  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A3693  taurine transporter subunit  30.61 
 
 
284 aa  122  7e-27  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_3936  taurine transporter subunit  30.61 
 
 
284 aa  122  7e-27  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_0260  taurine transporter subunit  30.61 
 
 
284 aa  122  7e-27  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1822  aliphatic sulfonates ABC transporter, permease protein  32.05 
 
 
269 aa  122  8e-27  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0692  ABC taurine transporter, inner membrane subunit  33.33 
 
 
306 aa  122  9e-27  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.00000000618741  normal  0.0440204 
 
 
-
 
NC_009972  Haur_2787  binding-protein-dependent transport systems inner membrane component  29.69 
 
 
272 aa  122  9e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.334714  n/a   
 
 
-
 
NC_014165  Tbis_1380  binding-protein-dependent transporter inner membrane component  32.05 
 
 
277 aa  122  9e-27  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.153307 
 
 
-
 
NC_009075  BURPS668_A2220  taurine ABC transporter, permease protein  34.74 
 
 
283 aa  121  9.999999999999999e-27  Burkholderia pseudomallei 668  Bacteria  normal  0.215273  n/a   
 
 
-
 
NC_009832  Spro_4564  taurine transporter subunit  30.37 
 
 
279 aa  121  9.999999999999999e-27  Serratia proteamaculans 568  Bacteria  normal  normal  0.746145 
 
 
-
 
NC_010508  Bcenmc03_1539  binding-protein-dependent transport systems inner membrane component  31.2 
 
 
270 aa  121  9.999999999999999e-27  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0890555  normal 
 
 
-
 
NC_009076  BURPS1106A_1837  aliphatic sulfonates ABC transporter, permease protein  32.05 
 
 
269 aa  120  1.9999999999999998e-26  Burkholderia pseudomallei 1106a  Bacteria  normal  0.669476  n/a   
 
 
-
 
NC_005945  BAS2712  sulfonate ABC transporter permease  31.14 
 
 
282 aa  121  1.9999999999999998e-26  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2894  binding-protein-dependent transport systems inner membrane component  34.07 
 
 
321 aa  120  1.9999999999999998e-26  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.438311 
 
 
-
 
NC_007435  BURPS1710b_A0620  permease component of taurine ABC transporter  34.74 
 
 
253 aa  120  1.9999999999999998e-26  Burkholderia pseudomallei 1710b  Bacteria  decreased coverage  0.00192231  n/a   
 
 
-
 
NC_008835  BMA10229_2019  taurine ABC transporter, permease protein  34.57 
 
 
285 aa  120  1.9999999999999998e-26  Burkholderia mallei NCTC 10229  Bacteria  normal  0.484134  n/a   
 
 
-
 
NC_009012  Cthe_2803  binding-protein-dependent transport systems inner membrane component  32.27 
 
 
259 aa  120  1.9999999999999998e-26  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00122675  n/a   
 
 
-
 
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