3 homologs were found in PanDaTox collection
for query gene Vapar_0020 on replicon NC_012791
Organism: Variovorax paradoxus S110



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012791  Vapar_0020  hypothetical protein  100 
 
 
189 aa  388  1e-107  Variovorax paradoxus S110  Bacteria  decreased coverage  0.00154703  n/a   
 
 
-
 
NC_008781  Pnap_0026  hypothetical protein  59.68 
 
 
183 aa  225  4e-58  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.262685  normal  0.496359 
 
 
-
 
NC_008825  Mpe_A0142  hypothetical protein  70.07 
 
 
202 aa  197  5e-50  Methylibium petroleiphilum PM1  Bacteria  decreased coverage  0.00249827  normal 
 
 
-
 
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