More than 300 homologs were found in PanDaTox collection
for query gene VSAL_II1022 on replicon NC_011313
Organism: Aliivibrio salmonicida LFI1238



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009784  VIBHAR_04784  histidine kinase  76.27 
 
 
628 aa  934    Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011313  VSAL_II1022  methyl-accepting chemotaxis protein  100 
 
 
628 aa  1268    Aliivibrio salmonicida LFI1238  Bacteria  normal  0.771007  n/a   
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  74.36 
 
 
628 aa  941    Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0252  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.66 
 
 
623 aa  442  9.999999999999999e-123  Shewanella woodyi ATCC 51908  Bacteria  normal  0.866394  normal 
 
 
-
 
NC_008321  Shewmr4_3752  methyl-accepting chemotaxis sensory transducer  44.01 
 
 
623 aa  432  1e-120  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3950  methyl-accepting chemotaxis sensory transducer  44.08 
 
 
623 aa  430  1e-119  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3825  methyl-accepting chemotaxis sensory transducer  43.85 
 
 
623 aa  430  1e-119  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4557  methyl-accepting chemotaxis protein  43.85 
 
 
623 aa  426  1e-118  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_0194  methyl-accepting chemotaxis sensory transducer  43.28 
 
 
623 aa  425  1e-117  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0193  methyl-accepting chemotaxis sensory transducer  43.44 
 
 
623 aa  419  9.999999999999999e-116  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_4274  methyl-accepting chemotaxis sensory transducer with Cache sensor  43.6 
 
 
623 aa  418  9.999999999999999e-116  Shewanella baltica OS195  Bacteria  normal  normal  0.179842 
 
 
-
 
NC_009665  Shew185_4141  methyl-accepting chemotaxis sensory transducer  43.6 
 
 
623 aa  418  9.999999999999999e-116  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0194  methyl-accepting chemotaxis sensory transducer with Cache sensor  43.6 
 
 
623 aa  418  9.999999999999999e-116  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_1629  methyl-accepting chemotaxis sensory transducer with Cache sensor  43.65 
 
 
623 aa  414  1e-114  Shewanella pealeana ATCC 700345  Bacteria  normal  0.438395  n/a   
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  40.6 
 
 
630 aa  413  1e-114  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  40.6 
 
 
630 aa  414  1e-114  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  40.94 
 
 
630 aa  413  1e-114  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  40.94 
 
 
630 aa  414  1e-114  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_0323  methyl-accepting chemotaxis sensory transducer  43.85 
 
 
623 aa  415  1e-114  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01884  hypothetical protein  39.62 
 
 
627 aa  408  1.0000000000000001e-112  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  40.44 
 
 
630 aa  403  1e-111  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  40.37 
 
 
639 aa  405  1e-111  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003139  methyl-accepting chemotaxis protein  40.09 
 
 
627 aa  399  9.999999999999999e-111  Vibrio sp. Ex25  Bacteria  normal  0.116124  n/a   
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  40.44 
 
 
630 aa  400  9.999999999999999e-111  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  40.76 
 
 
630 aa  397  1e-109  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  40.76 
 
 
630 aa  394  1e-108  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  38.97 
 
 
633 aa  393  1e-108  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_009438  Sputcn32_3017  methyl-accepting chemotaxis sensory transducer  40.6 
 
 
630 aa  382  1e-104  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0799  methyl-accepting chemotaxis protein  40.13 
 
 
624 aa  373  1e-102  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  36.08 
 
 
630 aa  366  1e-100  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  39.04 
 
 
631 aa  354  2e-96  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_00119  methyl-accepting chemotaxis protein  38.23 
 
 
626 aa  344  2.9999999999999997e-93  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_1383  methyl-accepting chemotaxis sensory transducer  35.47 
 
 
636 aa  334  3e-90  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00353653  normal  0.775857 
 
 
-
 
NC_010506  Swoo_0712  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.73 
 
 
627 aa  322  9.999999999999999e-87  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0412159  hitchhiker  0.0000400753 
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.27 
 
 
626 aa  314  3.9999999999999997e-84  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.9 
 
 
626 aa  307  5.0000000000000004e-82  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  31.61 
 
 
632 aa  273  1e-71  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  36.35 
 
 
623 aa  270  4e-71  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  32.02 
 
 
627 aa  267  5e-70  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  31.16 
 
 
632 aa  264  3e-69  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_007005  Psyr_2220  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  33.53 
 
 
646 aa  260  5.0000000000000005e-68  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.071358  normal  0.520396 
 
 
-
 
NC_009831  Ssed_3477  putative methyl-accepting chemotaxis protein  35.01 
 
 
622 aa  259  8e-68  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000522984 
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  33.64 
 
 
623 aa  259  1e-67  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_2448  methyl-accepting chemotaxis protein  34.24 
 
 
646 aa  258  2e-67  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.718596  n/a   
 
 
-
 
NC_009438  Sputcn32_2121  methyl-accepting chemotaxis sensory transducer  34.05 
 
 
622 aa  258  2e-67  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1439  methyl-accepting chemotaxis protein  29.4 
 
 
641 aa  257  4e-67  Colwellia psychrerythraea 34H  Bacteria  normal  0.336763  n/a   
 
 
-
 
NC_010501  PputW619_0425  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.36 
 
 
630 aa  257  5e-67  Pseudomonas putida W619  Bacteria  normal  0.461628  normal 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  43.63 
 
 
712 aa  255  1.0000000000000001e-66  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.67 
 
 
628 aa  255  2.0000000000000002e-66  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_009457  VC0395_A1741  methyl-accepting chemotaxis protein  35.11 
 
 
623 aa  254  2.0000000000000002e-66  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0657  chemotaxis sensory transducer, Cache sensor  33.47 
 
 
648 aa  255  2.0000000000000002e-66  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.511779  normal 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  31.35 
 
 
643 aa  254  3e-66  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  43.34 
 
 
713 aa  254  3e-66  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_009052  Sbal_2364  methyl-accepting chemotaxis sensory transducer  34.67 
 
 
622 aa  254  4.0000000000000004e-66  Shewanella baltica OS155  Bacteria  normal  0.493821  n/a   
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  31.51 
 
 
628 aa  253  9.000000000000001e-66  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  29.89 
 
 
625 aa  253  1e-65  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  29.59 
 
 
636 aa  253  1e-65  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  29.92 
 
 
629 aa  252  1e-65  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  29.92 
 
 
629 aa  252  2e-65  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  43.06 
 
 
712 aa  252  2e-65  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  30.4 
 
 
645 aa  251  3e-65  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_007492  Pfl01_4431  chemotaxis sensory transducer, Cache sensor  31.52 
 
 
629 aa  251  4e-65  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  43.9 
 
 
716 aa  250  5e-65  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  30.4 
 
 
645 aa  250  6e-65  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  30.4 
 
 
645 aa  249  8e-65  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_012918  GM21_0525  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.93 
 
 
632 aa  249  1e-64  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009456  VC0395_0316  methyl-accepting chemotaxis protein  34.66 
 
 
652 aa  249  1e-64  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  30.18 
 
 
630 aa  248  2e-64  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  33.62 
 
 
639 aa  248  2e-64  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  34.04 
 
 
638 aa  247  4e-64  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  34.68 
 
 
638 aa  247  4.9999999999999997e-64  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  33.83 
 
 
640 aa  246  8e-64  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  29.74 
 
 
645 aa  246  9e-64  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  29.91 
 
 
626 aa  245  9.999999999999999e-64  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.72 
 
 
626 aa  245  9.999999999999999e-64  Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_012856  Rpic12D_0523  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.37 
 
 
608 aa  245  1.9999999999999999e-63  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  30.87 
 
 
629 aa  244  3e-63  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_010501  PputW619_4580  methyl-accepting chemotaxis sensory transducer  32.78 
 
 
648 aa  244  3.9999999999999997e-63  Pseudomonas putida W619  Bacteria  normal  normal  0.0108713 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  42.33 
 
 
568 aa  244  3.9999999999999997e-63  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007336  Reut_C6319  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  29.64 
 
 
601 aa  244  3.9999999999999997e-63  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  30.2 
 
 
638 aa  244  3.9999999999999997e-63  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.87 
 
 
609 aa  243  6e-63  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2480  methyl-accepting chemotaxis protein  30.6 
 
 
629 aa  242  2e-62  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3534  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  30.52 
 
 
629 aa  241  2e-62  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.667463  normal  0.0882884 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  42.29 
 
 
548 aa  241  2e-62  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_011312  VSAL_I2193  methyl-accepting chemotaxis protein  40.73 
 
 
697 aa  240  6.999999999999999e-62  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0906  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  30.84 
 
 
626 aa  239  8e-62  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  42.17 
 
 
541 aa  239  1e-61  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_0584  methyl-accepting chemotaxis transducer  33.67 
 
 
647 aa  236  7e-61  Pseudomonas putida KT2440  Bacteria  normal  0.77697  normal  0.644217 
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  30.24 
 
 
629 aa  236  8e-61  Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_007005  Psyr_2246  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  30.98 
 
 
629 aa  235  1.0000000000000001e-60  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.265681  normal  0.412954 
 
 
-
 
NC_004578  PSPTO_1061  methyl-accepting chemotaxis protein  30.42 
 
 
626 aa  235  2.0000000000000002e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.646209  n/a   
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  30.31 
 
 
645 aa  235  2.0000000000000002e-60  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_26280  putative chemotaxis transducer  42.81 
 
 
545 aa  234  2.0000000000000002e-60  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.917899 
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  32.79 
 
 
626 aa  234  3e-60  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3827  methyl-accepting chemotaxis transducer  40.62 
 
 
695 aa  234  3e-60  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000221184 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  43.94 
 
 
636 aa  234  4.0000000000000004e-60  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009512  Pput_0623  methyl-accepting chemotaxis sensory transducer  33.27 
 
 
647 aa  233  6e-60  Pseudomonas putida F1  Bacteria  normal  0.494937  normal 
 
 
-
 
NC_004347  SO_4454  methyl-accepting chemotaxis protein  34.89 
 
 
642 aa  233  7.000000000000001e-60  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  41.36 
 
 
637 aa  233  9e-60  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
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