More than 300 homologs were found in PanDaTox collection
for query gene VSAL_I2075 on replicon NC_011312
Organism: Aliivibrio salmonicida LFI1238



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011312  VSAL_I2075  methyl-accepting chemotaxis protein  100 
 
 
362 aa  738    Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_04747  methyl-accepting chemotaxis protein  80.06 
 
 
361 aa  600  1e-170  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_0524  methyl-accepting chemotaxis protein  53.39 
 
 
367 aa  363  3e-99  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3981  methyl-accepting chemotaxis sensory transducer  47.8 
 
 
362 aa  336  2.9999999999999997e-91  Marinomonas sp. MWYL1  Bacteria  normal  0.684526  normal  0.542266 
 
 
-
 
NC_004347  SO_1144  methyl-accepting chemotaxis protein  46.41 
 
 
362 aa  325  1e-87  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_3522  methyl-accepting chemotaxis sensory transducer  45.96 
 
 
362 aa  319  3.9999999999999996e-86  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3397  methyl-accepting chemotaxis sensory transducer  45.96 
 
 
362 aa  319  3.9999999999999996e-86  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3301  methyl-accepting chemotaxis sensory transducer  45.4 
 
 
362 aa  315  6e-85  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1055  methyl-accepting chemotaxis sensory transducer  45.4 
 
 
362 aa  315  8e-85  Shewanella baltica OS223  Bacteria  normal  0.0655525  hitchhiker  0.0000230906 
 
 
-
 
NC_008321  Shewmr4_0968  methyl-accepting chemotaxis sensory transducer  44.85 
 
 
362 aa  314  9.999999999999999e-85  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1006  methyl-accepting chemotaxis sensory transducer  44.85 
 
 
362 aa  315  9.999999999999999e-85  Shewanella sp. MR-7  Bacteria  normal  normal  0.963071 
 
 
-
 
NC_009438  Sputcn32_2936  methyl-accepting chemotaxis sensory transducer  45.86 
 
 
362 aa  312  5.999999999999999e-84  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3185  putative methyl-accepting chemotaxis sensory transducer  44.41 
 
 
360 aa  302  5.000000000000001e-81  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0970  methyl-accepting chemotaxis sensory transducer  49.68 
 
 
362 aa  300  3e-80  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2964  methyl-accepting chemotaxis sensory transducer  41.62 
 
 
361 aa  267  2.9999999999999995e-70  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C3384  putative methyl-accepting chemotaxis protein  32.65 
 
 
352 aa  179  4.999999999999999e-44  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.644477  normal  0.732859 
 
 
-
 
NC_011094  SeSA_A3320  putative methyl-accepting chemotaxis protein  32.65 
 
 
351 aa  179  4.999999999999999e-44  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.781767  normal 
 
 
-
 
NC_011080  SNSL254_A3390  putative methyl-accepting chemotaxis protein  32.65 
 
 
351 aa  179  4.999999999999999e-44  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.927334 
 
 
-
 
NC_011149  SeAg_B3310  putative methyl-accepting chemotaxis protein  32.65 
 
 
352 aa  179  4.999999999999999e-44  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.740696  n/a   
 
 
-
 
NC_011205  SeD_A3483  putative methyl-accepting chemotaxis protein  32.65 
 
 
352 aa  179  4.999999999999999e-44  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_2497  methyl-accepting chemotaxis sensory transducer  40.73 
 
 
372 aa  173  5e-42  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.854874 
 
 
-
 
NC_011138  MADE_03785  methyl-accepting chemotaxis protein  32.53 
 
 
360 aa  166  5e-40  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0416  methyl-accepting chemotaxis sensory transducer  30.64 
 
 
366 aa  157  4e-37  Thauera sp. MZ1T  Bacteria  normal  0.217637  n/a   
 
 
-
 
NC_007575  Suden_0283  methyl-accepting chemotaxis sensory transducer  39.36 
 
 
442 aa  152  8e-36  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.0447763  n/a   
 
 
-
 
NC_003912  CJE0498  methyl-accepting chemotaxis protein  31.4 
 
 
365 aa  149  8e-35  Campylobacter jejuni RM1221  Bacteria  normal  0.654005  n/a   
 
 
-
 
NC_008787  CJJ81176_0473  methyl-accepting chemotaxis protein  31.4 
 
 
365 aa  148  2.0000000000000003e-34  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.614165  n/a   
 
 
-
 
NC_013512  Sdel_2026  chemotaxis sensory transducer  34.93 
 
 
440 aa  139  1e-31  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_0975  methyl-accepting chemotaxis protein  31.12 
 
 
365 aa  135  8e-31  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.245078  n/a   
 
 
-
 
NC_013512  Sdel_0367  chemotaxis sensory transducer  30.87 
 
 
483 aa  133  5e-30  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.124323  n/a   
 
 
-
 
NC_007575  Suden_0043  methyl-accepting chemotaxis sensory transducer  37.13 
 
 
421 aa  133  5e-30  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0983  methyl-accepting chemotaxis sensory transducer  29.28 
 
 
720 aa  132  7.999999999999999e-30  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0921  methyl-accepting chemotaxis sensory transducer  38.73 
 
 
483 aa  130  2.0000000000000002e-29  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0989  methyl-accepting chemotaxis sensory transducer  33.6 
 
 
720 aa  124  2e-27  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0922  methyl-accepting chemotaxis sensory transducer  34.14 
 
 
495 aa  123  5e-27  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_012039  Cla_1032  MCP-domain signal transduction protein  32.52 
 
 
375 aa  122  7e-27  Campylobacter lari RM2100  Bacteria  normal  0.60166  n/a   
 
 
-
 
NC_009802  CCC13826_1521  methyl-accepting chemotaxis protein  31.91 
 
 
360 aa  122  7e-27  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0157  chemotaxis sensory transducer  31.56 
 
 
447 aa  121  1.9999999999999998e-26  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.0930636  n/a   
 
 
-
 
NC_002939  GSU1032  methyl-accepting chemotaxis protein  28.61 
 
 
645 aa  120  3e-26  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_1496  methyl-accepting chemotaxis sensory transducer  33.47 
 
 
632 aa  117  1.9999999999999998e-25  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3525  methyl-accepting chemotaxis sensory transducer  27.89 
 
 
658 aa  115  8.999999999999998e-25  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0981  methyl-accepting chemotaxis sensory transducer  31.4 
 
 
635 aa  115  1.0000000000000001e-24  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.779847  n/a   
 
 
-
 
NC_009483  Gura_0375  methyl-accepting chemotaxis sensory transducer  30.48 
 
 
674 aa  114  2.0000000000000002e-24  Geobacter uraniireducens Rf4  Bacteria  normal  0.129925  n/a   
 
 
-
 
NC_012918  GM21_0365  methyl-accepting chemotaxis sensory transducer  29.54 
 
 
700 aa  112  1.0000000000000001e-23  Geobacter sp. M21  Bacteria  n/a    normal  0.0784998 
 
 
-
 
NC_008346  Swol_0971  putative methyl-accepting chemotaxis sensory transducer  26.87 
 
 
777 aa  110  4.0000000000000004e-23  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.271758  n/a   
 
 
-
 
NC_011126  HY04AAS1_0569  methyl-accepting chemotaxis sensory transducer  29.58 
 
 
483 aa  108  1e-22  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0016  chemotaxis sensory transducer  30.03 
 
 
357 aa  107  3e-22  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.760621  n/a   
 
 
-
 
NC_009654  Mmwyl1_0457  methyl-accepting chemotaxis sensory transducer  34.47 
 
 
356 aa  107  4e-22  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_1836  methyl-accepting chemotaxis sensory transducer  35.75 
 
 
359 aa  106  7e-22  Marinomonas sp. MWYL1  Bacteria  normal  0.126283  normal  0.522282 
 
 
-
 
NC_011146  Gbem_0383  methyl-accepting chemotaxis sensory transducer  28.62 
 
 
700 aa  105  1e-21  Geobacter bemidjiensis Bem  Bacteria  normal  0.424843  n/a   
 
 
-
 
NC_009456  VC0395_0372  methyl-accepting chemotaxis protein  43.17 
 
 
465 aa  105  1e-21  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1897  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  27.65 
 
 
1170 aa  104  3e-21  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3394  methyl-accepting chemotaxis sensory transducer  29.19 
 
 
664 aa  104  3e-21  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000171268  n/a   
 
 
-
 
NC_008740  Maqu_1216  methyl-accepting chemotaxis sensory transducer  31.42 
 
 
452 aa  102  8e-21  Marinobacter aquaeolei VT8  Bacteria  normal  0.133682  n/a   
 
 
-
 
NC_011146  Gbem_0798  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
541 aa  102  1e-20  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1752  methyl-accepting chemotaxis sensory transducer  47.86 
 
 
897 aa  101  2e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.10138  n/a   
 
 
-
 
NC_010483  TRQ2_0564  methyl-accepting chemotaxis sensory transducer with Cache sensor  44.96 
 
 
660 aa  100  3e-20  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.0020921  n/a   
 
 
-
 
NC_009486  Tpet_0550  methyl-accepting chemotaxis sensory transducer  44.96 
 
 
660 aa  100  3e-20  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.00000171017  n/a   
 
 
-
 
NC_009718  Fnod_0128  methyl-accepting chemotaxis sensory transducer  43.09 
 
 
663 aa  100  4e-20  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.0154965  n/a   
 
 
-
 
NC_009715  CCV52592_1961  putative DNA-binding response regulator  27.3 
 
 
421 aa  100  5e-20  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_1507  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
762 aa  100  5e-20  Petrotoga mobilis SJ95  Bacteria  normal  0.463366  n/a   
 
 
-
 
NC_002939  GSU1033  methyl-accepting chemotaxis protein  43.44 
 
 
533 aa  99.8  6e-20  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_0657  methyl-accepting chemotaxis sensory transducer  38.46 
 
 
617 aa  100  6e-20  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_0728  methyl-accepting chemotaxis sensory transducer  35.56 
 
 
537 aa  99.8  7e-20  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012039  Cla_0962  MCP-domain signal transduction protein  43.95 
 
 
458 aa  99.8  7e-20  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_3929  methyl-accepting chemotaxis protein  40.35 
 
 
505 aa  99.4  8e-20  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  33.17 
 
 
549 aa  99  1e-19  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1534  methyl-accepting chemotaxis sensory transducer  49.17 
 
 
297 aa  99  1e-19  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3371  methyl-accepting chemotaxis sensory transducer  58.24 
 
 
440 aa  99  1e-19  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2969  methyl-accepting chemotaxis sensory transducer  41.29 
 
 
440 aa  99  1e-19  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_0194  methyl-accepting chemotaxis sensory transducer  28.72 
 
 
622 aa  99  1e-19  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.00784755  n/a   
 
 
-
 
NC_009665  Shew185_0972  methyl-accepting chemotaxis sensory transducer  58.24 
 
 
440 aa  99  1e-19  Shewanella baltica OS185  Bacteria  normal  0.803806  n/a   
 
 
-
 
NC_008740  Maqu_2111  methyl-accepting chemotaxis sensory transducer  44 
 
 
572 aa  99  1e-19  Marinobacter aquaeolei VT8  Bacteria  normal  0.138456  n/a   
 
 
-
 
NC_002939  GSU0401  methyl-accepting chemotaxis protein, putative  38.85 
 
 
539 aa  98.2  2e-19  Geobacter sulfurreducens PCA  Bacteria  normal  0.395676  n/a   
 
 
-
 
NC_006274  BCZK2273  methyl-accepting chemotaxis protein  57.65 
 
 
650 aa  97.8  2e-19  Bacillus cereus E33L  Bacteria  normal  0.487735  n/a   
 
 
-
 
NC_007103  pE33L466_0016  methyl-accepting chemotaxis protein  57.65 
 
 
660 aa  97.8  2e-19  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3264  methyl-accepting chemotaxis sensory transducer  32.6 
 
 
528 aa  97.4  3e-19  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_3282  methyl-accepting chemotaxis protein  57.65 
 
 
660 aa  97.1  4e-19  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS3056  methyl-accepting chemotaxis protein  57.65 
 
 
650 aa  97.1  4e-19  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1902  histidine kinase, HAMP region: chemotaxis sensory transducer  51.52 
 
 
547 aa  97.1  4e-19  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2828  methyl-accepting chemotaxis sensory transducer  33.97 
 
 
550 aa  97.4  4e-19  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000014913 
 
 
-
 
NC_007530  GBAA_3291  methyl-accepting chemotaxis protein  57.65 
 
 
650 aa  97.1  4e-19  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.279097  n/a   
 
 
-
 
NC_011769  DvMF_1214  methyl-accepting chemotaxis sensory transducer  33.97 
 
 
550 aa  96.7  5e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0629375 
 
 
-
 
NC_011658  BCAH187_A0687  methyl-accepting chemotaxis protein  41.61 
 
 
658 aa  96.7  5e-19  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_0511  methyl-accepting chemotaxis protein  29.04 
 
 
361 aa  96.7  5e-19  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.737393  n/a   
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  34.78 
 
 
584 aa  97.1  5e-19  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_011884  Cyan7425_3745  methyl-accepting chemotaxis sensory transducer  38.46 
 
 
852 aa  96.7  6e-19  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_0063  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.86 
 
 
522 aa  96.7  6e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2939  methyl-accepting chemotaxis sensory transducer  34.62 
 
 
696 aa  96.7  6e-19  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00000015868 
 
 
-
 
NC_008751  Dvul_1295  methyl-accepting chemotaxis sensory transducer  36.22 
 
 
771 aa  96.7  6e-19  Desulfovibrio vulgaris DP4  Bacteria  decreased coverage  0.000170719  normal  0.104593 
 
 
-
 
NC_008228  Patl_4181  methyl-accepting chemotaxis sensory transducer  44.78 
 
 
498 aa  96.3  7e-19  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.07397  n/a   
 
 
-
 
NC_010814  Glov_3312  methyl-accepting chemotaxis sensory transducer  43.2 
 
 
533 aa  96.3  7e-19  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0960  methyl-accepting chemotaxis sensory transducer  57.65 
 
 
666 aa  96.3  8e-19  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000181378  n/a   
 
 
-
 
NC_009616  Tmel_1120  methyl-accepting chemotaxis sensory transducer  32.39 
 
 
664 aa  96.3  8e-19  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00177625  n/a   
 
 
-
 
NC_010718  Nther_1008  methyl-accepting chemotaxis sensory transducer  32.32 
 
 
574 aa  96.3  8e-19  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_1776  methyl-accepting chemotaxis sensory transducer  32.39 
 
 
664 aa  96.3  8e-19  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2081  methyl-accepting chemotaxis sensory transducer  35.16 
 
 
668 aa  95.9  9e-19  Dickeya dadantii Ech703  Bacteria  normal  0.622232  n/a   
 
 
-
 
NC_013161  Cyan8802_2778  methyl-accepting chemotaxis sensory transducer with GAF sensor  34.3 
 
 
1153 aa  95.9  9e-19  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.970502 
 
 
-
 
NC_011726  PCC8801_3339  methyl-accepting chemotaxis sensory transducer with GAF sensor  34.3 
 
 
1153 aa  95.9  9e-19  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_003912  CJE1253  methyl-accepting chemotaxis protein  40.25 
 
 
429 aa  95.5  1e-18  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3912  methyl-accepting chemotaxis sensory transducer  42.96 
 
 
713 aa  95.9  1e-18  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
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