More than 300 homologs were found in PanDaTox collection
for query gene VSAL_I1636 on replicon NC_011312
Organism: Aliivibrio salmonicida LFI1238



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011312  VSAL_I1636  methyl-accepting chemotaxis protein  100 
 
 
547 aa  1098    Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_011313  VSAL_II0170  methyl-accepting chemotaxis protein  72.22 
 
 
543 aa  368  1e-100  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1353  methyl-accepting chemotaxis sensory transducer  34.97 
 
 
547 aa  303  6.000000000000001e-81  Pseudomonas mendocina ymp  Bacteria  normal  0.769572  normal 
 
 
-
 
NC_008740  Maqu_3809  methyl-accepting chemotaxis sensory transducer  33.39 
 
 
547 aa  296  6e-79  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0341  methyl-accepting chemotaxis sensory transducer  33.94 
 
 
544 aa  292  1e-77  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013512  Sdel_2256  chemotaxis sensory transducer  35.07 
 
 
548 aa  285  2.0000000000000002e-75  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.000776973  n/a   
 
 
-
 
NC_007005  Psyr_1789  chemotaxis sensory transducer  32.43 
 
 
546 aa  278  1e-73  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.478165  decreased coverage  0.000703042 
 
 
-
 
NC_004578  PSPTO_3685  methyl-accepting chemotaxis protein  32.01 
 
 
546 aa  271  2e-71  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_0065  methyl-accepting chemotaxis protein  31.77 
 
 
548 aa  265  1e-69  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.826549  n/a   
 
 
-
 
NC_009438  Sputcn32_0513  methyl-accepting chemotaxis sensory transducer  34.19 
 
 
542 aa  254  3e-66  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0755  chemotaxis sensory transducer  32.46 
 
 
567 aa  246  9.999999999999999e-64  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_0033  methyl-accepting chemotaxis sensory transducer  30.97 
 
 
593 aa  245  9.999999999999999e-64  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.684678  n/a   
 
 
-
 
NC_008577  Shewana3_2017  methyl-accepting chemotaxis sensory transducer  47.43 
 
 
543 aa  229  1e-58  Shewanella sp. ANA-3  Bacteria  normal  0.75882  hitchhiker  0.00000661881 
 
 
-
 
NC_004347  SO_1434  methyl-accepting chemotaxis protein  39.89 
 
 
543 aa  227  4e-58  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011370  Rleg2_6126  methyl-accepting chemotaxis sensory transducer  30.43 
 
 
650 aa  218  2e-55  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.375381  normal  0.0878449 
 
 
-
 
NC_009901  Spea_3672  methyl-accepting chemotaxis sensory transducer  38.03 
 
 
619 aa  212  2e-53  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0070  methyl-accepting chemotaxis protein  37.96 
 
 
547 aa  204  5e-51  Vibrio cholerae O395  Bacteria  normal  0.740118  n/a   
 
 
-
 
NC_013457  VEA_001231  methyl-accepting chemotaxis protein  30.49 
 
 
542 aa  203  8e-51  Vibrio sp. Ex25  Bacteria  normal  0.554422  n/a   
 
 
-
 
NC_009784  VIBHAR_05097  sensor protein TorS  39.77 
 
 
542 aa  201  3e-50  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_001261  methyl-accepting chemotaxis protein  37.73 
 
 
547 aa  201  3.9999999999999996e-50  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05136  torS; sensor protein TorS  31.75 
 
 
558 aa  199  2.0000000000000003e-49  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011992  Dtpsy_2395  methyl-accepting chemotaxis sensory transducer  28.57 
 
 
572 aa  198  3e-49  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2968  methyl-accepting chemotaxis sensory transducer  28.57 
 
 
572 aa  197  5.000000000000001e-49  Acidovorax sp. JS42  Bacteria  normal  normal  0.536058 
 
 
-
 
NC_012912  Dd1591_0641  methyl-accepting chemotaxis sensory transducer  32.64 
 
 
537 aa  196  8.000000000000001e-49  Dickeya zeae Ech1591  Bacteria  normal  0.245653  n/a   
 
 
-
 
NC_009456  VC0395_0265  methyl-accepting chemotaxis protein  43.59 
 
 
561 aa  194  3e-48  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2538  methyl-accepting chemotaxis sensory transducer  28.39 
 
 
521 aa  189  1e-46  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0549264  normal  0.252917 
 
 
-
 
NC_007005  Psyr_1150  chemotaxis sensory transducer  33.72 
 
 
551 aa  186  1.0000000000000001e-45  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1334  methyl-accepting chemotaxis protein  32.23 
 
 
550 aa  184  3e-45  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011313  VSAL_II0771  methyl-accepting chemotaxis protein  35.64 
 
 
661 aa  181  2.9999999999999997e-44  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2502  putative methyl-accepting chemotaxis sensory transducer  29.91 
 
 
649 aa  180  5.999999999999999e-44  Shewanella amazonensis SB2B  Bacteria  normal  0.988754  normal 
 
 
-
 
NC_011313  VSAL_II0712  methyl-accepting chemotaxis citrate transducer  37.57 
 
 
546 aa  180  7e-44  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0350  toxin co-regulated pilus biosynthesis protein I  34.34 
 
 
620 aa  179  2e-43  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6645  methyl-accepting chemotaxis sensory transducer  25.99 
 
 
583 aa  178  2e-43  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.983597 
 
 
-
 
NC_011758  Mchl_5556  methyl-accepting chemotaxis sensory transducer  30.11 
 
 
563 aa  175  1.9999999999999998e-42  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.319143  normal  0.0264732 
 
 
-
 
NC_010501  PputW619_2593  methyl-accepting chemotaxis sensory transducer  27.17 
 
 
540 aa  175  1.9999999999999998e-42  Pseudomonas putida W619  Bacteria  normal  normal  0.591477 
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  28.44 
 
 
541 aa  174  5e-42  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2284  methyl-accepting chemotaxis sensory transducer  25.18 
 
 
547 aa  173  5.999999999999999e-42  Acidovorax citrulli AAC00-1  Bacteria  normal  0.206976  hitchhiker  0.0000952985 
 
 
-
 
NC_009439  Pmen_3218  methyl-accepting chemotaxis sensory transducer  27.46 
 
 
551 aa  171  3e-41  Pseudomonas mendocina ymp  Bacteria  normal  0.359634  normal  0.412717 
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  27.12 
 
 
541 aa  171  3e-41  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  33.43 
 
 
650 aa  169  1e-40  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  32.19 
 
 
640 aa  167  4e-40  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_010002  Daci_5852  methyl-accepting chemotaxis sensory transducer  24.43 
 
 
618 aa  167  5.9999999999999996e-40  Delftia acidovorans SPH-1  Bacteria  normal  0.217953  normal 
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  41.54 
 
 
653 aa  166  8e-40  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_009438  Sputcn32_1438  methyl-accepting chemotaxis sensory transducer  26.17 
 
 
540 aa  166  8e-40  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_012854  Rleg_6402  methyl-accepting chemotaxis sensory transducer  43.22 
 
 
688 aa  166  9e-40  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.579482  normal  0.320846 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  32.87 
 
 
712 aa  166  1.0000000000000001e-39  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  31.91 
 
 
629 aa  165  2.0000000000000002e-39  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  32.87 
 
 
633 aa  165  2.0000000000000002e-39  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  28.96 
 
 
712 aa  165  2.0000000000000002e-39  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_011368  Rleg2_4524  methyl-accepting chemotaxis sensory transducer  39.43 
 
 
661 aa  165  2.0000000000000002e-39  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.66296 
 
 
-
 
NC_002947  PP_0317  methyl-accepting chemotaxis sensory transducer  30.67 
 
 
541 aa  164  3e-39  Pseudomonas putida KT2440  Bacteria  normal  0.365849  decreased coverage  0.0000342214 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  33.65 
 
 
541 aa  164  3e-39  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_0339  methyl-accepting chemotaxis sensory transducer  30.67 
 
 
541 aa  164  3e-39  Pseudomonas putida F1  Bacteria  normal  0.722367  normal 
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  33.91 
 
 
638 aa  164  4.0000000000000004e-39  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3441  methyl-accepting chemotaxis sensory transducer  31.82 
 
 
541 aa  164  4.0000000000000004e-39  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  30.77 
 
 
640 aa  163  6e-39  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_009665  Shew185_0897  methyl-accepting chemotaxis sensory transducer  31.82 
 
 
541 aa  164  6e-39  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  34.3 
 
 
541 aa  163  7e-39  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  41.22 
 
 
653 aa  162  1e-38  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  33.86 
 
 
638 aa  162  1e-38  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2284  methyl-accepting chemotaxis sensory transducer  34.6 
 
 
653 aa  162  1e-38  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00297466 
 
 
-
 
NC_011663  Sbal223_0921  methyl-accepting chemotaxis sensory transducer  31.62 
 
 
541 aa  162  1e-38  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0924  methyl-accepting chemotaxis sensory transducer  36.86 
 
 
543 aa  162  2e-38  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0959  methyl-accepting chemotaxis sensory transducer  36.86 
 
 
543 aa  162  2e-38  Shewanella sp. MR-7  Bacteria  normal  0.656726  normal  0.666936 
 
 
-
 
NC_009831  Ssed_0529  methyl-accepting chemotaxis protein-like protein  33.55 
 
 
677 aa  161  3e-38  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  34.54 
 
 
638 aa  160  4e-38  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0340  methyl-accepting chemotaxis sensory transducer  32.65 
 
 
541 aa  160  4e-38  Pseudomonas putida GB-1  Bacteria  normal  0.582352  normal 
 
 
-
 
NC_008577  Shewana3_0923  methyl-accepting chemotaxis sensory transducer  41.6 
 
 
543 aa  160  4e-38  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2263  methyl-accepting chemotaxis sensory transducer  31.77 
 
 
541 aa  160  5e-38  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  34.54 
 
 
638 aa  160  5e-38  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_007005  Psyr_3114  histidine kinase, HAMP region: chemotaxis sensory transducer  34.35 
 
 
541 aa  160  6e-38  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.860602  normal 
 
 
-
 
NC_009997  Sbal195_0931  methyl-accepting chemotaxis sensory transducer  31.53 
 
 
541 aa  160  7e-38  Shewanella baltica OS195  Bacteria  normal  normal  0.476721 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  36.49 
 
 
674 aa  160  7e-38  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_007005  Psyr_4706  histidine kinase, HAMP region: chemotaxis sensory transducer  33 
 
 
541 aa  159  8e-38  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4890  methyl-accepting chemotaxis sensory transducer  32.94 
 
 
541 aa  159  1e-37  Pseudomonas putida W619  Bacteria  normal  0.452969  normal  0.355365 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  33.23 
 
 
638 aa  159  1e-37  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_007005  Psyr_1491  histidine kinase, HAMP region: chemotaxis sensory transducer  34.18 
 
 
539 aa  158  2e-37  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2907  chemotaxis sensory transducer  33.44 
 
 
541 aa  158  2e-37  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.300582 
 
 
-
 
NC_009512  Pput_2091  methyl-accepting chemotaxis sensory transducer  32.39 
 
 
541 aa  158  2e-37  Pseudomonas putida F1  Bacteria  normal  0.596764  normal 
 
 
-
 
NC_009831  Ssed_1012  hypothetical protein  32.22 
 
 
626 aa  158  3e-37  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2268  methyl-accepting chemotaxis sensory transducer  37.13 
 
 
541 aa  158  3e-37  Pseudomonas putida GB-1  Bacteria  normal  0.255239  normal 
 
 
-
 
NC_009512  Pput_4520  methyl-accepting chemotaxis sensory transducer  33.75 
 
 
639 aa  157  4e-37  Pseudomonas putida F1  Bacteria  normal  normal  0.886367 
 
 
-
 
NC_002947  PP_4658  methyl-accepting chemotaxis sensory transducer  33.75 
 
 
639 aa  157  5.0000000000000005e-37  Pseudomonas putida KT2440  Bacteria  normal  0.415489  normal 
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  37.68 
 
 
573 aa  157  5.0000000000000005e-37  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_004578  PSPTO_4624  methyl-accepting chemotaxis protein  33.86 
 
 
539 aa  157  5.0000000000000005e-37  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.140064  n/a   
 
 
-
 
NC_009439  Pmen_2471  methyl-accepting chemotaxis sensory transducer  31.81 
 
 
425 aa  157  5.0000000000000005e-37  Pseudomonas mendocina ymp  Bacteria  normal  0.817651  normal 
 
 
-
 
NC_007912  Sde_0391  methyl-accepting chemotaxis sensory transducer  31.13 
 
 
499 aa  157  5.0000000000000005e-37  Saccharophagus degradans 2-40  Bacteria  normal  0.0811848  normal 
 
 
-
 
NC_011663  Sbal223_3382  methyl-accepting chemotaxis sensory transducer  40.98 
 
 
543 aa  157  6e-37  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3455  methyl-accepting chemotaxis sensory transducer  40.98 
 
 
543 aa  157  6e-37  Shewanella baltica OS185  Bacteria  normal  0.0121993  n/a   
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  37.54 
 
 
634 aa  157  6e-37  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0908  methyl-accepting chemotaxis sensory transducer  40.98 
 
 
543 aa  157  6e-37  Shewanella baltica OS155  Bacteria  normal  0.073872  n/a   
 
 
-
 
NC_009997  Sbal195_3579  methyl-accepting chemotaxis sensory transducer  40.98 
 
 
543 aa  156  7e-37  Shewanella baltica OS195  Bacteria  normal  normal  0.0986947 
 
 
-
 
NC_009438  Sputcn32_0925  methyl-accepting chemotaxis sensory transducer  37.98 
 
 
543 aa  157  7e-37  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0778  methyl-accepting chemotaxis sensory transducer  33.23 
 
 
639 aa  155  1e-36  Pseudomonas putida W619  Bacteria  normal  normal  0.66043 
 
 
-
 
NC_010681  Bphyt_0409  methyl-accepting chemotaxis sensory transducer  24.37 
 
 
585 aa  155  1e-36  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1006  methyl-accepting chemotaxis sensory transducer  37.1 
 
 
573 aa  156  1e-36  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4833  chemotaxis sensory transducer  33.44 
 
 
541 aa  155  1e-36  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.000956827  normal  0.082646 
 
 
-
 
NC_007951  Bxe_A4301  methyl-accepting chemotaxis sensory transducer  25 
 
 
587 aa  156  1e-36  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_004349  SO_A0106  methyl-accepting chemotaxis protein  34.94 
 
 
546 aa  155  2e-36  Shewanella oneidensis MR-1  Bacteria  normal  0.827543  n/a   
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  30.95 
 
 
640 aa  154  2.9999999999999998e-36  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
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