More than 300 homologs were found in PanDaTox collection
for query gene VEA_000091 on replicon NC_013457
Organism: Vibrio sp. Ex25



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013457  VEA_000091  transcriptional regulatory protein UhpA  100 
 
 		 202 aa  409  1e-113  Vibrio sp. Ex25  Bacteria  normal  0.136186  n/a   
 
 
-
 
CP001509  ECD_03553  DNA-binding response regulator in two-component regulatory system wtih UhpB  64.62 
 
 		 196 aa  246  1e-64  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
CP001637  EcDH1_0034  two component transcriptional regulator, LuxR family  64.62 
 
 		 196 aa  246  1e-64  Escherichia coli DH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010658  SbBS512_E4250  DNA-binding transcriptional activator UhpA  64.62 
 
 		 196 aa  246  1e-64  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_009800  EcHS_A3882  DNA-binding transcriptional activator UhpA  64.62 
 
 		 196 aa  246  1e-64  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_010498  EcSMS35_4034  DNA-binding transcriptional activator UhpA  64.62 
 
 		 196 aa  246  1e-64  Escherichia coli SMS-3-5  Bacteria  normal  1  normal  0.383338 
 
 
-
 
NC_010468  EcolC_0030  DNA-binding transcriptional activator UhpA  64.62 
 
 		 196 aa  246  1e-64  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011353  ECH74115_5099  DNA-binding transcriptional activator UhpA  64.62 
 
 		 196 aa  246  1e-64  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  0.0828785 
 
 
-
 
NC_012892  B21_03495  hypothetical protein  64.62 
 
 		 196 aa  246  1e-64  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
NC_009801  EcE24377A_4178  DNA-binding transcriptional activator UhpA  64.62 
 
 		 196 aa  246  1e-64  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_012912  Dd1591_3504  DNA-binding transcriptional activator UhpA  63.08 
 
 		 196 aa  244  4.9999999999999997e-64  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_011205  SeD_A4179  DNA-binding transcriptional activator UhpA  64.14 
 
 		 196 aa  244  6e-64  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011094  SeSA_A4000  DNA-binding transcriptional activator UhpA  64.14 
 
 		 196 aa  244  6e-64  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.348805  normal  1 
 
 
-
 
NC_011080  SNSL254_A4071  DNA-binding transcriptional activator UhpA  64.14 
 
 		 196 aa  244  6e-64  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011149  SeAg_B4016  DNA-binding transcriptional activator UhpA  64.14 
 
 		 196 aa  244  6e-64  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_011083  SeHA_C4121  DNA-binding transcriptional activator UhpA  63.64 
 
 		 196 aa  242  3e-63  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.97066  normal  1 
 
 
-
 
NC_009436  Ent638_0027  DNA-binding transcriptional activator UhpA  62.05 
 
 		 197 aa  239  2e-62  Enterobacter sp. 638  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010465  YPK_0081  two component LuxR family transcriptional regulator  58.03 
 
 		 196 aa  227  9e-59  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_010159  YpAngola_A4132  two-component system response regulator  57.51 
 
 		 196 aa  227  1e-58  Yersinia pestis Angola  Bacteria  normal  1  normal  0.249835 
 
 
-
 
NC_009708  YpsIP31758_4080  transcriptional regulatory protein UhpA  57.51 
 
 		 196 aa  227  1e-58  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_009832  Spro_0132  two component LuxR family transcriptional regulator  59.28 
 
 		 196 aa  226  2e-58  Serratia proteamaculans 568  Bacteria  normal  0.401597  normal  1 
 
 
-
 
NC_010465  YPK_2499  two component LuxR family transcriptional regulator  48.29 
 
 		 209 aa  200  9.999999999999999e-51  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.449467  n/a   
 
 
-
 
NC_009708  YpsIP31758_2402  LuxR family DNA-binding response regulator  48.29 
 
 		 209 aa  200  9.999999999999999e-51  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.0000000000000137953  n/a   
 
 
-
 
NC_010159  YpAngola_A1688  LuxR family DNA-binding response regulator  48.29 
 
 		 209 aa  200  9.999999999999999e-51  Yersinia pestis Angola  Bacteria  hitchhiker  0.000000202542  normal  0.0533619 
 
 
-
 
NC_009456  VC0395_0622  transcriptional regulator UhpA  51.98 
 
 		 208 aa  195  3e-49  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_012880  Dd703_2482  two component transcriptional regulator, LuxR family  49.03 
 
 		 211 aa  192  2e-48  Dickeya dadantii Ech703  Bacteria  normal  0.46622  n/a   
 
 
-
 
NC_013421  Pecwa_1775  two component transcriptional regulator, LuxR family  48.29 
 
 		 209 aa  189  2e-47  Pectobacterium wasabiae WPP163  Bacteria  normal  0.814588  n/a   
 
 
-
 
NC_012917  PC1_1369  two component transcriptional regulator, LuxR family  48.29 
 
 		 218 aa  188  5e-47  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.380225  n/a   
 
 
-
 
NC_009436  Ent638_0836  two component LuxR family transcriptional regulator  48.09 
 
 		 210 aa  166  2e-40  Enterobacter sp. 638  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011353  ECH74115_0438  transcriptional regulatory protein UhpA  45.9 
 
 		 209 aa  159  2e-38  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007952  Bxe_B2471  two component LuxR family transcriptional regulator  39.71 
 
 		 220 aa  136  2e-31  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.55611 
 
 
-
 
NC_013739  Cwoe_1298  two component transcriptional regulator, LuxR family  37.88 
 
 		 228 aa  134  9.999999999999999e-31  Conexibacter woesei DSM 14684  Bacteria  normal  0.70055  normal  1 
 
 
-
 
NC_009441  Fjoh_4628  two component LuxR family transcriptional regulator  38.16 
 
 		 219 aa  133  1.9999999999999998e-30  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_007947  Mfla_1987  two component LuxR family transcriptional regulator  38.92 
 
 		 215 aa  132  3.9999999999999996e-30  Methylobacillus flagellatus KT  Bacteria  normal  0.0949899  normal  1 
 
 
-
 
NC_009921  Franean1_4062  two component LuxR family transcriptional regulator  35.58 
 
 		 216 aa  131  6.999999999999999e-30  Frankia sp. EAN1pec  Bacteria  normal  0.0448793  normal  0.300284 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  35.1 
 
 		 215 aa  131  7.999999999999999e-30  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_6933  two component LuxR family transcriptional regulator  35.1 
 
 		 244 aa  130  1.0000000000000001e-29  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.322421 
 
 
-
 
NC_008781  Pnap_0790  two component LuxR family transcriptional regulator  36.14 
 
 		 214 aa  130  1.0000000000000001e-29  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.870503  normal  0.997505 
 
 
-
 
NC_013530  Xcel_0190  two component transcriptional regulator, LuxR family  36.59 
 
 		 219 aa  127  1.0000000000000001e-28  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.146862  n/a   
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  34.6 
 
 		 221 aa  126  2.0000000000000002e-28  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  36.45 
 
 		 222 aa  126  3e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_011071  Smal_1526  two component transcriptional regulator, LuxR family  37.93 
 
 		 215 aa  125  4.0000000000000003e-28  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.88337  normal  1 
 
 
-
 
NC_002977  MCA0777  LuxR family DNA binding response regulator  38.05 
 
 		 215 aa  125  4.0000000000000003e-28  Methylococcus capsulatus str. Bath  Bacteria  normal  0.891731  n/a   
 
 
-
 
NC_010524  Lcho_0242  two component LuxR family transcriptional regulator  42.08 
 
 		 211 aa  125  4.0000000000000003e-28  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000159114 
 
 
-
 
NC_008825  Mpe_A3494  two component LuxR family transcriptional regulator  38.89 
 
 		 226 aa  125  5e-28  Methylibium petroleiphilum PM1  Bacteria  normal  0.514045  normal  1 
 
 
-
 
NC_008009  Acid345_1691  two component LuxR family transcriptional regulator  39.49 
 
 		 208 aa  124  9e-28  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.0637899 
 
 
-
 
NC_008825  Mpe_A0357  two-component response regulator  37.5 
 
 		 210 aa  124  9e-28  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00848176  normal  1 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  37.68 
 
 		 213 aa  122  3e-27  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013501  Rmar_1005  two component transcriptional regulator, LuxR family  36.68 
 
 		 211 aa  122  4e-27  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_008709  Ping_1192  transcriptional regulator of LuxR family protein  35.64 
 
 		 214 aa  122  5e-27  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010506  Swoo_3747  two component LuxR family transcriptional regulator  34.85 
 
 		 206 aa  121  6e-27  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007614  Nmul_A1336  two component LuxR family transcriptional regulator  36.36 
 
 		 208 aa  121  6e-27  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_007404  Tbd_1588  two component LuxR family transcriptional regulator  38.07 
 
 		 215 aa  120  9.999999999999999e-27  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.731747  normal  0.987016 
 
 
-
 
NC_011071  Smal_1888  two component transcriptional regulator, LuxR family  34.34 
 
 		 212 aa  120  9.999999999999999e-27  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.265772 
 
 
-
 
NC_012856  Rpic12D_0153  two component transcriptional regulator, LuxR family  38 
 
 		 210 aa  120  9.999999999999999e-27  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  35.86 
 
 		 213 aa  120  9.999999999999999e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  34.33 
 
 		 213 aa  120  1.9999999999999998e-26  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  35.42 
 
 		 211 aa  120  1.9999999999999998e-26  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_2782  two component LuxR family transcriptional regulator  38 
 
 		 214 aa  120  1.9999999999999998e-26  Geobacter uraniireducens Rf4  Bacteria  normal  0.834695  n/a   
 
 
-
 
NC_010002  Daci_0651  two component LuxR family transcriptional regulator  39.51 
 
 		 209 aa  119  1.9999999999999998e-26  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.713834 
 
 
-
 
NC_010524  Lcho_3850  two component LuxR family transcriptional regulator  39.15 
 
 		 224 aa  119  3e-26  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_009656  PSPA7_1229  transcriptional regulator NarL  36.18 
 
 		 219 aa  119  3e-26  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_003295  RSc0292  response regulator transcription regulator protein  37.5 
 
 		 210 aa  119  3.9999999999999996e-26  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007948  Bpro_0709  two component LuxR family transcriptional regulator  34.63 
 
 		 224 aa  119  3.9999999999999996e-26  Polaromonas sp. JS666  Bacteria  normal  0.421893  normal  1 
 
 
-
 
NC_007948  Bpro_4296  two component LuxR family transcriptional regulator  36.14 
 
 		 214 aa  119  3.9999999999999996e-26  Polaromonas sp. JS666  Bacteria  normal  0.891496  normal  1 
 
 
-
 
NC_008752  Aave_4382  two component LuxR family transcriptional regulator  38.05 
 
 		 209 aa  119  3.9999999999999996e-26  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012917  PC1_2202  two component transcriptional regulator, LuxR family  32.5 
 
 		 213 aa  118  4.9999999999999996e-26  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010682  Rpic_0145  two component transcriptional regulator, LuxR family  37.5 
 
 		 210 aa  118  4.9999999999999996e-26  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_1595  two component LuxR family transcriptional regulator  37 
 
 		 209 aa  118  6e-26  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00167261 
 
 
-
 
NC_007404  Tbd_2786  two component LuxR family transcriptional regulator  32.34 
 
 		 210 aa  118  7e-26  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.0443035  normal  0.922606 
 
 
-
 
NC_007492  Pfl01_5126  two component LuxR family transcriptional regulator  37.25 
 
 		 209 aa  118  7e-26  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.135043  normal  0.384971 
 
 
-
 
NC_010117  COXBURSA331_A0896  LuxR family transcriptional regulator  34.63 
 
 		 214 aa  118  7.999999999999999e-26  Coxiella burnetii RSA 331  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_1782  two component LuxR family transcriptional regulator  34.01 
 
 		 214 aa  117  7.999999999999999e-26  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000360675 
 
 
-
 
NC_010468  EcolC_1725  response regulator  35.96 
 
 		 218 aa  117  7.999999999999999e-26  Escherichia coli ATCC 8739  Bacteria  hitchhiker  0.000351159  normal  1 
 
 
-
 
NC_007908  Rfer_0563  two component LuxR family transcriptional regulator  37.81 
 
 		 209 aa  117  9e-26  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  35.96 
 
 		 215 aa  117  9e-26  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_009483  Gura_2780  two component LuxR family transcriptional regulator  36.19 
 
 		 226 aa  117  9.999999999999999e-26  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  37.98 
 
 		 221 aa  117  9.999999999999999e-26  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_011353  ECH74115_2686  response regulator  35.96 
 
 		 218 aa  117  9.999999999999999e-26  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.000000957663  normal  0.053055 
 
 
-
 
NC_007973  Rmet_0090  two component LuxR family transcriptional regulator  36.5 
 
 		 210 aa  117  9.999999999999999e-26  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008255  CHU_1317  response regulator  32.41 
 
 		 220 aa  117  9.999999999999999e-26  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  35.1 
 
 		 220 aa  117  9.999999999999999e-26  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  35.68 
 
 		 219 aa  117  9.999999999999999e-26  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.817999 
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  37 
 
 		 212 aa  117  9.999999999999999e-26  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  33.99 
 
 		 216 aa  117  9.999999999999999e-26  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_009800  EcHS_A2012  response regulator  35.96 
 
 		 218 aa  117  9.999999999999999e-26  Escherichia coli HS  Bacteria  hitchhiker  0.000000000124814  n/a   
 
 
-
 
NC_009455  DehaBAV1_0849  two component LuxR family transcriptional regulator  34.33 
 
 		 209 aa  117  1.9999999999999998e-25  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_4618  LuxR response regulator receiver  36.27 
 
 		 209 aa  116  1.9999999999999998e-25  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.601025 
 
 
-
 
NC_007958  RPD_2401  response regulator receiver  35.44 
 
 		 230 aa  116  1.9999999999999998e-25  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0808908 
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  35.55 
 
 		 215 aa  117  1.9999999999999998e-25  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  35.51 
 
 		 216 aa  116  3e-25  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  36.24 
 
 		 232 aa  116  3e-25  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
CP001637  EcDH1_1732  two component transcriptional regulator, LuxR family  35.47 
 
 		 218 aa  115  3.9999999999999997e-25  Escherichia coli DH1  Bacteria  hitchhiker  0.00000000000321601  n/a   
 
 
-
 
NC_010658  SbBS512_E1041  response regulator  35.47 
 
 		 218 aa  115  3.9999999999999997e-25  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.0000000644757  n/a   
 
 
-
 
NC_007347  Reut_A0121  two component LuxR family transcriptional regulator  36.68 
 
 		 210 aa  115  3.9999999999999997e-25  Ralstonia eutropha JMP134  Bacteria  normal  0.830531  n/a   
 
 
-
 
NC_010117  COXBURSA331_A1168  LuxR family transcriptional regulator  35.61 
 
 		 216 aa  115  3.9999999999999997e-25  Coxiella burnetii RSA 331  Bacteria  normal  1  n/a   
 
 
-
 
NC_010717  PXO_04459  two-component system regulatory protein  36.5 
 
 		 213 aa  115  3.9999999999999997e-25  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011094  SeSA_A2103  response regulator  35.47 
 
 		 218 aa  115  3.9999999999999997e-25  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.0532421  hitchhiker  0.00988724 
 
 
-
 
NC_010498  EcSMS35_1269  response regulator  35.47 
 
 		 218 aa  115  3.9999999999999997e-25  Escherichia coli SMS-3-5  Bacteria  hitchhiker  0.0000584326  hitchhiker  0.00198125 
 
 
-
 
NC_011205  SeD_A1296  response regulator  35.47 
 
 		 218 aa  115  3.9999999999999997e-25  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.0547167  hitchhiker  0.00000564902 
 
 
-
 
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