9 homologs were found in PanDaTox collection
for query gene VC0395_A2353 on replicon NC_009457
Organism: Vibrio cholerae O395



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009457  VC0395_A2353  hypothetical protein  100 
 
 
120 aa  237  4e-62  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_1113  hypothetical protein  38.53 
 
 
115 aa  77  0.00000000000009  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.341492  n/a   
 
 
-
 
NC_006369  lpl1083  hypothetical protein  31.19 
 
 
119 aa  65.1  0.0000000003  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_008752  Aave_3361  regulatory protein, MarR  35.23 
 
 
107 aa  63.2  0.000000001  Acidovorax citrulli AAC00-1  Bacteria  normal  0.282254  normal 
 
 
-
 
NC_012560  Avin_52410  hypothetical protein  35.05 
 
 
105 aa  62  0.000000003  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_41590  hypothetical protein  36.14 
 
 
105 aa  59.7  0.00000001  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0688  hypothetical protein  33.7 
 
 
122 aa  57.4  0.00000007  Burkholderia xenovorans LB400  Bacteria  normal  0.353875  normal 
 
 
-
 
NC_008786  Veis_3127  hypothetical protein  31.31 
 
 
112 aa  53.5  0.000001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.338224  decreased coverage  0.00835036 
 
 
-
 
NC_007517  Gmet_1051  hypothetical protein  31.94 
 
 
120 aa  42.4  0.002  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000141356 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>