More than 300 homologs were found in PanDaTox collection
for query gene Tter_0088 on replicon NC_013525
Organism: Thermobaculum terrenum ATCC BAA-798



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013525  Tter_0088  Holliday junction resolvase YqgF  100 
 
 
149 aa  290  4e-78  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_2024  Holliday junction resolvase YqgF  49.65 
 
 
144 aa  118  3e-26  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.330713  n/a   
 
 
-
 
NC_011884  Cyan7425_2514  Holliday junction resolvase-like protein  46.43 
 
 
150 aa  109  1.0000000000000001e-23  Cyanothece sp. PCC 7425  Bacteria  normal  0.36708  normal 
 
 
-
 
NC_008346  Swol_0470  Holliday junction resolvase YqgF  44.2 
 
 
141 aa  109  1.0000000000000001e-23  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.00000000599692  n/a   
 
 
-
 
NC_007413  Ava_3804  Holliday junction resolvase-like protein  42.65 
 
 
151 aa  107  4.0000000000000004e-23  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0796335  normal 
 
 
-
 
NC_013161  Cyan8802_1969  Holliday junction resolvase-like protein  41.91 
 
 
139 aa  104  4e-22  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.0212683 
 
 
-
 
NC_011726  PCC8801_1942  Holliday junction resolvase-like protein  41.91 
 
 
139 aa  104  4e-22  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011891  A2cp1_2727  Holliday junction resolvase-like protein  45.39 
 
 
137 aa  102  2e-21  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2633  Holliday junction resolvase-like protein  45.39 
 
 
137 aa  102  2e-21  Anaeromyxobacter sp. K  Bacteria  normal  0.854397  n/a   
 
 
-
 
NC_007644  Moth_1640  Holliday junction resolvase YqgF  42.57 
 
 
140 aa  101  3e-21  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.278901  normal  0.163549 
 
 
-
 
NC_009253  Dred_0775  Holliday junction resolvase YqgF  41.18 
 
 
137 aa  101  3e-21  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000000463594  n/a   
 
 
-
 
NC_011729  PCC7424_3098  Holliday junction resolvase-like protein  38.85 
 
 
151 aa  101  4e-21  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008312  Tery_4379  Holliday junction resolvase-like protein  38.97 
 
 
149 aa  100  6e-21  Trichodesmium erythraeum IMS101  Bacteria  normal  0.556882  normal  0.251804 
 
 
-
 
NC_014248  Aazo_4148  Holliday junction resolvase YqgF  42.86 
 
 
158 aa  100  7e-21  'Nostoc azollae' 0708  Bacteria  normal  0.927535  n/a   
 
 
-
 
NC_013216  Dtox_2265  Holliday junction resolvase YqgF  45.99 
 
 
139 aa  100  8e-21  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.0000233904 
 
 
-
 
NC_010320  Teth514_1491  Holliday junction resolvase-like protein  38.85 
 
 
139 aa  100  1e-20  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000748947  n/a   
 
 
-
 
NC_011899  Hore_05800  Holliday junction resolvase YqgF  40.14 
 
 
140 aa  99  2e-20  Halothermothrix orenii H 168  Bacteria  normal  0.209228  n/a   
 
 
-
 
NC_007760  Adeh_1232  Holliday junction resolvase-like protein  45.65 
 
 
137 aa  98.2  3e-20  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_0556  Holliday junction resolvase YqgF  39.26 
 
 
153 aa  98.2  4e-20  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.901255  normal  0.0480752 
 
 
-
 
NC_009675  Anae109_2535  Holliday junction resolvase-like protein  45.99 
 
 
137 aa  97.8  5e-20  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.52249 
 
 
-
 
NC_008261  CPF_2031  Holliday junction resolvase-like protein  39.42 
 
 
137 aa  96.7  1e-19  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_1748  Holliday junction resolvase-like protein  39.42 
 
 
137 aa  96.7  1e-19  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1778  Holliday junction resolvase YqgF  40.43 
 
 
141 aa  96.7  1e-19  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.140554 
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  40.15 
 
 
146 aa  95.9  2e-19  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_008531  LEUM_0558  Holliday junction resolvase-like protein  38.89 
 
 
143 aa  94  6e-19  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2408  Holliday junction resolvase-like protein  43.06 
 
 
156 aa  93.6  7e-19  Nocardioides sp. JS614  Bacteria  normal  0.332292  n/a   
 
 
-
 
NC_013947  Snas_3877  Holliday junction resolvase YqgF  43.36 
 
 
151 aa  93.2  1e-18  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.843962  normal 
 
 
-
 
NC_011661  Dtur_1024  Holliday junction resolvase YqgF  36.96 
 
 
141 aa  93.2  1e-18  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3225  Holliday junction resolvase YqgF  37.23 
 
 
141 aa  92.4  2e-18  Roseiflexus sp. RS-1  Bacteria  normal  0.387387  normal 
 
 
-
 
NC_008528  OEOE_1165  RNase H-like ribonuclease  38.57 
 
 
144 aa  92.4  2e-18  Oenococcus oeni PSU-1  Bacteria  normal  0.345189  n/a   
 
 
-
 
NC_013757  Gobs_3157  Holliday junction resolvase YqgF  39.86 
 
 
222 aa  91.7  3e-18  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.588989  n/a   
 
 
-
 
NC_014210  Ndas_3074  Holliday junction resolvase YqgF  41.96 
 
 
161 aa  90.9  5e-18  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.459764 
 
 
-
 
NC_011831  Cagg_0094  Holliday junction resolvase YqgF  39.13 
 
 
142 aa  90.9  5e-18  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.0018567  normal 
 
 
-
 
NC_013595  Sros_6093  endonuclease involved in recombination-like protein  46.48 
 
 
163 aa  91.3  5e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0746227  normal 
 
 
-
 
NC_013171  Apre_0938  Holliday junction resolvase YqgF  38.85 
 
 
139 aa  90.5  7e-18  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_07810  conserved hypothetical protein TIGR00250  39.72 
 
 
138 aa  89.4  1e-17  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.0182311 
 
 
-
 
NC_009921  Franean1_1695  Holliday junction resolvase-like protein  43.07 
 
 
188 aa  89.7  1e-17  Frankia sp. EAN1pec  Bacteria  normal  0.0458229  normal  0.165399 
 
 
-
 
NC_007604  Synpcc7942_2398  Holliday junction resolvase-like protein  39.71 
 
 
149 aa  89.7  1e-17  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0366153  hitchhiker  0.00151496 
 
 
-
 
NC_011830  Dhaf_3562  Holliday junction resolvase-like protein  40.44 
 
 
142 aa  88.6  2e-17  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000000000000329746  n/a   
 
 
-
 
NC_010816  BLD_0615  putative endonuclease for recombination  37.01 
 
 
152 aa  88.2  3e-17  Bifidobacterium longum DJO10A  Bacteria  normal  0.105236  n/a   
 
 
-
 
NC_009953  Sare_1820  Holliday junction resolvase YqgF  40.67 
 
 
153 aa  88.2  4e-17  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0000610168 
 
 
-
 
NC_007335  PMN2A_0199  Holliday junction resolvase YqgF  33.83 
 
 
144 aa  88.2  4e-17  Prochlorococcus marinus str. NATL2A  Bacteria  normal  0.102311  n/a   
 
 
-
 
NC_008532  STER_1938  Holliday junction resolvase-like protein  37.68 
 
 
139 aa  87.4  5e-17  Streptococcus thermophilus LMD-9  Bacteria  unclonable  0.0000000471473  n/a   
 
 
-
 
NC_007794  Saro_0906  Holliday junction resolvase-like protein  41.18 
 
 
155 aa  87  7e-17  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.167999  n/a   
 
 
-
 
NC_008819  NATL1_08311  endonuclease  33.08 
 
 
144 aa  86.7  9e-17  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.0380749  normal  0.23212 
 
 
-
 
NC_009484  Acry_0873  Holliday junction resolvase YqgF  41.91 
 
 
158 aa  86.7  9e-17  Acidiphilium cryptum JF-5  Bacteria  normal  0.205729  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0474  Holliday junction resolvase YqgF  36.49 
 
 
145 aa  86.3  1e-16  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00800439  n/a   
 
 
-
 
NC_004116  SAG2090  Holliday junction resolvase-like protein  36.69 
 
 
136 aa  85.5  2e-16  Streptococcus agalactiae 2603V/R  Bacteria  hitchhiker  0.000724166  n/a   
 
 
-
 
NC_011365  Gdia_3370  Holliday junction resolvase YqgF  38.97 
 
 
154 aa  85.5  2e-16  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.13465 
 
 
-
 
NC_009380  Strop_1829  Holliday junction resolvase YqgF  38.78 
 
 
153 aa  85.5  2e-16  Salinispora tropica CNB-440  Bacteria  normal  0.0551936  normal 
 
 
-
 
NC_008686  Pden_0510  Holliday junction resolvase-like protein  39.86 
 
 
158 aa  85.5  2e-16  Paracoccus denitrificans PD1222  Bacteria  normal  0.556579  normal 
 
 
-
 
NC_009727  CBUD_2194  Holliday junction resolvase-like protein  32.37 
 
 
141 aa  85.1  3e-16  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.401443  n/a   
 
 
-
 
NC_012669  Bcav_2015  Holliday junction resolvase YqgF  37.68 
 
 
163 aa  85.1  3e-16  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.756916  normal  0.07881 
 
 
-
 
NC_008530  LGAS_0423  Holliday junction resolvase-like protein  34.75 
 
 
143 aa  85.1  3e-16  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1329  Holliday junction resolvase YqgF  42.18 
 
 
173 aa  85.1  3e-16  Acidothermus cellulolyticus 11B  Bacteria  normal  0.0531797  normal  0.27422 
 
 
-
 
NC_013204  Elen_2554  Holliday junction resolvase YqgF  38.85 
 
 
138 aa  84.7  3e-16  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_0964  Holliday junction resolvase YqgF  40.28 
 
 
138 aa  83.6  8e-16  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_2488  Holliday junction resolvase YqgF  38.19 
 
 
138 aa  83.2  0.000000000000001  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000680199  n/a   
 
 
-
 
NC_010117  COXBURSA331_A2220  Holliday junction resolvase-like protein  31.65 
 
 
141 aa  82.8  0.000000000000002  Coxiella burnetii RSA 331  Bacteria  hitchhiker  0.0000000031992  n/a   
 
 
-
 
NC_008783  BARBAKC583_0838  hypothetical protein  35.92 
 
 
161 aa  82.4  0.000000000000002  Bartonella bacilliformis KC583  Bacteria  normal  0.115372  n/a   
 
 
-
 
NC_010424  Daud_0915  Holliday junction resolvase YqgF  35.25 
 
 
141 aa  82  0.000000000000003  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.242003  n/a   
 
 
-
 
NC_007799  ECH_0460  hypothetical protein  39.44 
 
 
156 aa  81.3  0.000000000000004  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3023  Holliday junction resolvase-like protein  37.68 
 
 
160 aa  81.3  0.000000000000004  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.438725  normal  0.394583 
 
 
-
 
NC_008044  TM1040_0967  Holliday junction resolvase-like protein  37.41 
 
 
157 aa  81.3  0.000000000000004  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_2279  Holliday junction resolvase-like protein  38.41 
 
 
168 aa  81.3  0.000000000000005  Nitrobacter hamburgensis X14  Bacteria  normal  0.273152  n/a   
 
 
-
 
NC_012850  Rleg_1714  Holliday junction resolvase-like protein  36.81 
 
 
164 aa  80.5  0.000000000000007  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.396791 
 
 
-
 
NC_009972  Haur_3633  Holliday junction resolvase YqgF  36.3 
 
 
158 aa  80.5  0.000000000000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1518  Holliday junction resolvase-like protein  36.81 
 
 
163 aa  79.7  0.00000000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.793177 
 
 
-
 
NC_009485  BBta_4721  Holliday junction resolvase-like protein  36.96 
 
 
161 aa  79.7  0.00000000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010655  Amuc_1191  Holliday junction resolvase YqgF  34.81 
 
 
141 aa  80.1  0.00000000000001  Akkermansia muciniphila ATCC BAA-835  Bacteria  hitchhiker  0.0000237997  normal 
 
 
-
 
NC_007778  RPB_2429  Holliday junction resolvase-like protein  36.55 
 
 
160 aa  79.7  0.00000000000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0446184 
 
 
-
 
NC_009719  Plav_2841  Holliday junction resolvase YqgF  35.04 
 
 
182 aa  80.1  0.00000000000001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.636675  normal  0.911101 
 
 
-
 
NC_008254  Meso_1361  Holliday junction resolvase YqgF  36.09 
 
 
160 aa  79.7  0.00000000000001  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_2297  Holliday junction resolvase YqgF  38.85 
 
 
150 aa  79.3  0.00000000000002  Clostridium phytofermentans ISDg  Bacteria  normal  0.470334  n/a   
 
 
-
 
NC_009636  Smed_0941  Holliday junction resolvase-like protein  38.46 
 
 
165 aa  79  0.00000000000002  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.22726 
 
 
-
 
NC_011898  Ccel_2239  Holliday junction resolvase-like protein  35.97 
 
 
142 aa  79  0.00000000000002  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.0000140275  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4233  Holliday junction resolvase-like protein  36.81 
 
 
137 aa  79  0.00000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000272031  n/a   
 
 
-
 
NC_010551  BamMC406_0755  Holliday junction resolvase-like protein  37.5 
 
 
149 aa  78.6  0.00000000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  0.302865  normal  0.26532 
 
 
-
 
NC_011894  Mnod_3314  Holliday junction resolvase YqgF  37.96 
 
 
163 aa  78.2  0.00000000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_0738  Holliday junction resolvase-like protein  37.5 
 
 
149 aa  78.6  0.00000000000003  Burkholderia ambifaria AMMD  Bacteria  normal  0.89107  n/a   
 
 
-
 
NC_013515  Smon_0417  Holliday junction resolvase YqgF  34.29 
 
 
142 aa  78.2  0.00000000000004  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_013170  Ccur_05110  conserved hypothetical protein TIGR00250  38.78 
 
 
140 aa  77.8  0.00000000000004  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_009513  Lreu_0535  Holliday junction resolvase-like protein  37.5 
 
 
147 aa  77.8  0.00000000000005  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000331559  n/a   
 
 
-
 
NC_013530  Xcel_1690  Holliday junction resolvase YqgF  39.86 
 
 
184 aa  77.4  0.00000000000006  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.480738  n/a   
 
 
-
 
NC_009338  Mflv_3762  Holliday junction resolvase YqgF  39.72 
 
 
175 aa  77.4  0.00000000000006  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.454353 
 
 
-
 
NC_009049  Rsph17029_1342  Holliday junction resolvase-like protein  38.52 
 
 
160 aa  77  0.00000000000008  Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.00888056  normal  0.184568 
 
 
-
 
NC_007493  RSP_2684  Holliday junction resolvase-like protein  38.52 
 
 
160 aa  77  0.00000000000008  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.173322  n/a   
 
 
-
 
NC_013739  Cwoe_3035  Holliday junction resolvase YqgF  35.77 
 
 
133 aa  77  0.00000000000008  Conexibacter woesei DSM 14684  Bacteria  normal  0.0101605  normal  0.0662243 
 
 
-
 
NC_011989  Avi_1768  Holliday junction resolvase-like protein  37.23 
 
 
158 aa  77  0.00000000000008  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3099  Holliday junction resolvase-like protein  36.11 
 
 
137 aa  77  0.00000000000009  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00212776  n/a   
 
 
-
 
NC_006369  lpl0621  Holliday junction resolvase-like protein  35.29 
 
 
139 aa  76.6  0.00000000000009  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_013173  Dbac_1790  Holliday junction resolvase YqgF  36.96 
 
 
133 aa  77  0.00000000000009  Desulfomicrobium baculatum DSM 4028  Bacteria  decreased coverage  0.00751815  n/a   
 
 
-
 
NC_014165  Tbis_2046  Holliday junction resolvase YqgF  45.03 
 
 
163 aa  76.6  0.00000000000009  Thermobispora bispora DSM 43833  Bacteria  normal  0.0425259  normal 
 
 
-
 
NC_006368  lpp0637  Holliday junction resolvase-like protein  35.29 
 
 
139 aa  76.6  0.0000000000001  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_007354  Ecaj_0565  hypothetical protein  35.92 
 
 
156 aa  76.6  0.0000000000001  Ehrlichia canis str. Jake  Bacteria  normal  0.690098  n/a   
 
 
-
 
NC_011725  BCB4264_A4506  Holliday junction resolvase-like protein  36.11 
 
 
137 aa  76.6  0.0000000000001  Bacillus cereus B4264  Bacteria  normal  0.860088  n/a   
 
 
-
 
NC_009428  Rsph17025_1879  Holliday junction resolvase-like protein  37.23 
 
 
160 aa  76.3  0.0000000000001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.620593  normal 
 
 
-
 
NC_007777  Francci3_3213  Holliday junction resolvase-like protein  38.57 
 
 
202 aa  76.3  0.0000000000001  Frankia sp. CcI3  Bacteria  normal  0.0825611  normal 
 
 
-
 
NC_009012  Cthe_0153  Holliday junction resolvase-like protein  38.73 
 
 
141 aa  76.3  0.0000000000001  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0185653  n/a   
 
 
-
 
NC_011772  BCG9842_B0730  Holliday junction resolvase-like protein  36.11 
 
 
137 aa  76.6  0.0000000000001  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000542239  normal 
 
 
-
 
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