13 homologs were found in PanDaTox collection
for query gene Tpet_1534 on replicon NC_009486
Organism: Thermotoga petrophila RKU-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009486  Tpet_1534  extracellular solute-binding protein  100 
 
 
430 aa  871  Thermotoga petrophila RKU-1  Bacteria  unclonable  1.45285e-09  n/a   
 
 
-
 
NC_010483  TRQ2_1583  extracellular solute-binding protein  98.1 
 
 
420 aa  838  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.000175887  n/a   
 
 
-
 
NC_008698  Tpen_1550  extracellular solute-binding protein  51.13 
 
 
428 aa  402  1e-111  Thermofilum pendens Hrk 5  Archaea  normal  n/a   
 
 
-
 
NC_012848  Rleg_5385  extracellular solute-binding protein family 1  40.82 
 
 
424 aa  286  4e-76  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.832628 
 
 
-
 
NC_014212  Mesil_0672  extracellular solute-binding protein family 1  38.67 
 
 
428 aa  285  2e-75  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.305152 
 
 
-
 
NC_013947  Snas_0173  extracellular solute-binding protein family 1  33.42 
 
 
443 aa  230  3e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_1713  extracellular solute-binding protein  25.38 
 
 
402 aa  121  3e-26  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1705  ABC-type sugar transport system periplasmic component-like protein  28.67 
 
 
283 aa  102  1e-20  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_0944  extracellular solute-binding protein family 1  23.6 
 
 
433 aa  50.4  7e-05  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.322748 
 
 
-
 
NC_010003  Pmob_0473  extracellular solute-binding protein  24.52 
 
 
420 aa  48.5  0.0002  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1955  extracellular solute-binding protein family 1  24.7 
 
 
419 aa  47  0.0007  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.974693  hitchhiker  0.000475348 
 
 
-
 
NC_013131  Caci_5330  extracellular solute-binding protein family 1  27.27 
 
 
438 aa  45.8  0.001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.489769  normal  0.341368 
 
 
-
 
NC_013530  Xcel_1138  extracellular solute-binding protein family 1  22.29 
 
 
423 aa  43.1  0.008  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.443513  n/a   
 
 
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