44 homologs were found in PanDaTox collection
for query gene Tpau_3784 on replicon NC_014158
Organism: Tsukamurella paurometabola DSM 20162



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_014158  Tpau_3784  putative transcriptional regulator, PaaX family  100 
 
 		 277 aa  533  1e-151  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
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NC_009664  Krad_2878  putative transcriptional regulator, PaaX family  40.39 
 
 		 263 aa  128  1.0000000000000001e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.212697  normal  0.21699 
 
 
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NC_013093  Amir_4282  putative transcriptional regulator, PaaX family  33.59 
 
 		 254 aa  117  1.9999999999999998e-25  Actinosynnema mirum DSM 43827  Bacteria  normal  0.399485  n/a   
 
 
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NC_014165  Tbis_1609  PaaX family transcriptional regulator  31.44 
 
 		 258 aa  80.9  0.00000000000002  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
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NC_013411  GYMC61_2835  transcriptional regulator, PaaX family  25 
 
 		 285 aa  80.9  0.00000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013159  Svir_19070  phenylacetic acid-responsive transcriptional repressor  29.29 
 
 		 292 aa  77.4  0.0000000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0202563  normal  1 
 
 
-
 
NC_013411  GYMC61_2859  transcriptional regulator, PaaX family  25.19 
 
 		 285 aa  75.9  0.0000000000007  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009921  Franean1_1685  PaaX family transcriptional regulator  28.63 
 
 		 333 aa  74.7  0.000000000002  Frankia sp. EAN1pec  Bacteria  normal  0.0710641  normal  0.260669 
 
 
-
 
NC_014151  Cfla_0294  transcriptional regulator, PaaX family  28.75 
 
 		 318 aa  71.2  0.00000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0429653  hitchhiker  0.0000864342 
 
 
-
 
NC_009485  BBta_2864  phenylacetic acid degradation operon negative regulatory protein paaX  29.8 
 
 		 293 aa  69.3  0.00000000007  Bradyrhizobium sp. BTAi1  Bacteria  decreased coverage  0.00499823  normal  0.0484276 
 
 
-
 
NC_013131  Caci_4899  transcriptional regulator, PaaX family  26.4 
 
 		 276 aa  64.3  0.000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.425131  normal  1 
 
 
-
 
NC_009654  Mmwyl1_3103  PaaX family transcriptional regulator  25.73 
 
 		 307 aa  62.8  0.000000005  Marinomonas sp. MWYL1  Bacteria  decreased coverage  0.000000661945  decreased coverage  0.0000397547 
 
 
-
 
NC_014212  Mesil_0980  transcriptional regulator, PaaX family  26.87 
 
 		 259 aa  62.8  0.000000006  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  0.148761 
 
 
-
 
NC_010322  PputGB1_2610  PaaX family transcriptional regulator  26.34 
 
 		 334 aa  61.2  0.00000002  Pseudomonas putida GB-1  Bacteria  normal  0.218497  normal  0.0704814 
 
 
-
 
NC_013946  Mrub_2629  PaaX family transcriptional regulator  25.52 
 
 		 259 aa  61.2  0.00000002  Meiothermus ruber DSM 1279  Bacteria  normal  0.495501  normal  1 
 
 
-
 
NC_002947  PP_3286  PaaX family transcriptional regulator  25.51 
 
 		 307 aa  59.3  0.00000006  Pseudomonas putida KT2440  Bacteria  normal  0.17765  normal  1 
 
 
-
 
NC_009512  Pput_2473  PaaX family transcriptional regulator  25.51 
 
 		 334 aa  58.2  0.0000001  Pseudomonas putida F1  Bacteria  normal  0.303711  normal  1 
 
 
-
 
NC_010501  PputW619_2623  PaaX family transcriptional regulator  24.69 
 
 		 334 aa  55.8  0.0000007  Pseudomonas putida W619  Bacteria  normal  0.312733  normal  0.0873289 
 
 
-
 
NC_009720  Xaut_0895  PaaX family transcriptional regulator  32.3 
 
 		 305 aa  55.1  0.000001  Xanthobacter autotrophicus Py2  Bacteria  normal  0.947925  normal  1 
 
 
-
 
NC_013947  Snas_6455  transcriptional regulator, PaaX family  32.19 
 
 		 260 aa  54.7  0.000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_7200  transcriptional regulator, PaaX family  30.56 
 
 		 292 aa  54.7  0.000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.803046  n/a   
 
 
-
 
NC_013739  Cwoe_2150  transcriptional regulator, PaaX family  31.02 
 
 		 289 aa  53.9  0.000003  Conexibacter woesei DSM 14684  Bacteria  normal  0.933136  normal  0.276366 
 
 
-
 
NC_007348  Reut_B3734  phenylacetic acid degradation operon negative regulatory protein PaaX  26.86 
 
 		 307 aa  53.1  0.000005  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0386  phenylacetic acid degradation operon negative regulatory protein PaaX  24.81 
 
 		 352 aa  52.4  0.000007  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.0000000187716  normal  0.0170462 
 
 
-
 
NC_008709  Ping_0661  PaaX domain-containing protein, C- domain  20.63 
 
 		 285 aa  51.6  0.00001  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014151  Cfla_2025  transcriptional regulator, PaaX family  29.91 
 
 		 306 aa  51.6  0.00001  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007925  RPC_0692  phenylacetic acid degradation operon negative regulatory protein PaaX  26.59 
 
 		 287 aa  51.2  0.00002  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.717402  normal  1 
 
 
-
 
NC_009484  Acry_0094  PaaX family transcriptional regulator  28.16 
 
 		 289 aa  51.2  0.00002  Acidiphilium cryptum JF-5  Bacteria  normal  0.339453  n/a   
 
 
-
 
NC_007958  RPD_1521  phenylacetic acid degradation operon negative regulatory protein PaaX  23.17 
 
 		 312 aa  50.8  0.00003  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009832  Spro_3083  PaaX family transcriptional regulator  24.24 
 
 		 312 aa  50.1  0.00004  Serratia proteamaculans 568  Bacteria  normal  1  normal  0.415086 
 
 
-
 
NC_013131  Caci_2009  transcriptional regulator, PaaX family  25.82 
 
 		 281 aa  48.1  0.0002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.429433  normal  1 
 
 
-
 
NC_013595  Sros_8420  putative transcriptional regulator, PaaX family  26.8 
 
 		 260 aa  47.4  0.0003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.289328  normal  1 
 
 
-
 
NC_013530  Xcel_0309  transcriptional regulator, PaaX family  28.75 
 
 		 302 aa  47  0.0004  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_009620  Smed_4146  PaaX family transcriptional regulator  25.65 
 
 		 305 aa  46.2  0.0005  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.85173 
 
 
-
 
NC_013235  Namu_0588  transcriptional regulator, PaaX family  28.1 
 
 		 276 aa  46.6  0.0005  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009338  Mflv_5085  PaaX domain-containing protein, C- domain  26.64 
 
 		 244 aa  45.1  0.001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.706044 
 
 
-
 
NC_013131  Caci_5523  transcriptional regulator, PaaX family  32.3 
 
 		 267 aa  44.3  0.002  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.543092 
 
 
-
 
NC_010506  Swoo_0216  PaaX family transcriptional regulator  22.13 
 
 		 311 aa  43.5  0.004  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  0.0165647 
 
 
-
 
NC_011894  Mnod_3357  transcriptional regulator, PaaX family  26.96 
 
 		 301 aa  43.1  0.005  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_1514  transcriptional regulator, PaaX family  29 
 
 		 316 aa  43.1  0.005  Thauera sp. MZ1T  Bacteria  normal  0.139923  n/a   
 
 
-
 
NC_013947  Snas_0703  transcriptional regulator, PaaX family  27.27 
 
 		 259 aa  42.4  0.007  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009800  EcHS_A1486  phenylacetic acid degradation operon negative regulatory protein PaaX  25.42 
 
 		 316 aa  42.4  0.009  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_010468  EcolC_2256  PaaX family transcriptional regulator  25.42 
 
 		 316 aa  42.4  0.009  Escherichia coli ATCC 8739  Bacteria  normal  0.203735  normal  1 
 
 
-
 
NC_009801  EcE24377A_1585  phenylacetic acid degradation operon negative regulatory protein PaaX  25.85 
 
 		 316 aa  42  0.01  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
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