More than 300 homologs were found in PanDaTox collection
for query gene Tpau_2872 on replicon NC_014158
Organism: Tsukamurella paurometabola DSM 20162



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  100 
 
 
218 aa  429  1e-119  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  71.49 
 
 
228 aa  305  4.0000000000000004e-82  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  65.9 
 
 
221 aa  256  1e-67  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  61.09 
 
 
224 aa  252  2.0000000000000002e-66  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  64.09 
 
 
218 aa  251  8.000000000000001e-66  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  61.57 
 
 
221 aa  245  3e-64  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  62.5 
 
 
215 aa  244  6e-64  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  57.14 
 
 
218 aa  243  1.9999999999999999e-63  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  60.09 
 
 
225 aa  243  1.9999999999999999e-63  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  59.81 
 
 
225 aa  238  8e-62  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  57.4 
 
 
226 aa  234  7e-61  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  57.14 
 
 
226 aa  234  9e-61  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  59.91 
 
 
225 aa  233  2.0000000000000002e-60  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  57.78 
 
 
229 aa  232  3e-60  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  55.8 
 
 
227 aa  231  7.000000000000001e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  55.81 
 
 
239 aa  231  7.000000000000001e-60  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  56.94 
 
 
216 aa  230  1e-59  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  55.56 
 
 
221 aa  230  2e-59  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  58.6 
 
 
217 aa  229  3e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  58.8 
 
 
302 aa  227  1e-58  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  55.76 
 
 
228 aa  226  2e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  56.64 
 
 
234 aa  225  4e-58  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  56.16 
 
 
222 aa  225  5.0000000000000005e-58  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  57.01 
 
 
215 aa  224  9e-58  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  53.24 
 
 
234 aa  223  2e-57  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  53.67 
 
 
225 aa  223  2e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  56.16 
 
 
221 aa  222  4e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  53.46 
 
 
219 aa  221  4.9999999999999996e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  56.62 
 
 
220 aa  221  6e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  56.68 
 
 
220 aa  221  7e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  54.09 
 
 
219 aa  221  7e-57  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  52.73 
 
 
220 aa  221  9.999999999999999e-57  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  54.75 
 
 
227 aa  220  9.999999999999999e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  53.64 
 
 
219 aa  220  9.999999999999999e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013530  Xcel_0239  two component transcriptional regulator, LuxR family  53.57 
 
 
230 aa  219  3e-56  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  56.11 
 
 
226 aa  218  3.9999999999999997e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  55.56 
 
 
215 aa  218  7e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  54.05 
 
 
224 aa  217  8.999999999999998e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  56.19 
 
 
227 aa  216  2e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  48.67 
 
 
233 aa  216  2.9999999999999998e-55  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  56.31 
 
 
225 aa  215  4e-55  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  53.21 
 
 
224 aa  215  4e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  53.46 
 
 
220 aa  215  4e-55  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.25 
 
 
230 aa  215  5e-55  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_014151  Cfla_0648  two component transcriptional regulator, LuxR family  57.01 
 
 
211 aa  214  5.9999999999999996e-55  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0377209  hitchhiker  0.00104431 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  55.71 
 
 
224 aa  214  9.999999999999999e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  53.7 
 
 
225 aa  213  9.999999999999999e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  55.96 
 
 
222 aa  213  1.9999999999999998e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  53.42 
 
 
225 aa  213  1.9999999999999998e-54  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  53.36 
 
 
226 aa  212  2.9999999999999995e-54  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  54.34 
 
 
230 aa  213  2.9999999999999995e-54  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  51.09 
 
 
242 aa  212  2.9999999999999995e-54  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  54.91 
 
 
234 aa  212  2.9999999999999995e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  53.67 
 
 
221 aa  213  2.9999999999999995e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  53.99 
 
 
213 aa  212  3.9999999999999995e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  54.26 
 
 
226 aa  211  5.999999999999999e-54  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  56.42 
 
 
221 aa  211  7.999999999999999e-54  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  55.25 
 
 
230 aa  211  7.999999999999999e-54  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  54.38 
 
 
217 aa  209  2e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  51.13 
 
 
230 aa  209  2e-53  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  53.49 
 
 
216 aa  210  2e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  52.94 
 
 
219 aa  210  2e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  51.13 
 
 
230 aa  209  3e-53  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.91 
 
 
226 aa  209  4e-53  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  47.83 
 
 
219 aa  207  7e-53  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  50.9 
 
 
228 aa  207  7e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  52.78 
 
 
218 aa  207  1e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  50.88 
 
 
223 aa  207  1e-52  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013235  Namu_0651  two component transcriptional regulator, LuxR family  50.45 
 
 
241 aa  206  2e-52  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  51.08 
 
 
231 aa  206  2e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  51.56 
 
 
225 aa  206  2e-52  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  51.39 
 
 
230 aa  206  2e-52  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  51.6 
 
 
223 aa  206  2e-52  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  51.63 
 
 
221 aa  206  3e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  51.6 
 
 
225 aa  206  3e-52  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  52.19 
 
 
228 aa  206  3e-52  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  53.39 
 
 
222 aa  206  3e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  50.45 
 
 
231 aa  205  4e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  55.66 
 
 
224 aa  205  5e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  51.87 
 
 
226 aa  204  8e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  51.57 
 
 
239 aa  204  8e-52  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  53.55 
 
 
213 aa  204  1e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.91 
 
 
229 aa  203  2e-51  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  53.21 
 
 
220 aa  202  3e-51  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  50.45 
 
 
241 aa  202  3e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  48.87 
 
 
222 aa  201  5e-51  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  49.53 
 
 
223 aa  201  6e-51  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.33 
 
 
236 aa  201  6e-51  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  49.31 
 
 
228 aa  201  9e-51  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.55 
 
 
244 aa  201  9.999999999999999e-51  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  50 
 
 
261 aa  199  3e-50  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  47.5 
 
 
250 aa  199  3e-50  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  52.49 
 
 
241 aa  199  3e-50  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013521  Sked_16860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.7 
 
 
258 aa  199  3.9999999999999996e-50  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.85724  normal  0.036031 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  52.79 
 
 
244 aa  198  3.9999999999999996e-50  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  49.76 
 
 
217 aa  198  3.9999999999999996e-50  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.482316 
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  50 
 
 
214 aa  198  5e-50  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  50 
 
 
224 aa  198  5e-50  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  53.05 
 
 
211 aa  198  6e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  49.52 
 
 
216 aa  197  7e-50  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
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