More than 300 homologs were found in PanDaTox collection
for query gene Tpau_1410 on replicon NC_014158
Organism: Tsukamurella paurometabola DSM 20162



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014158  Tpau_1410  two component transcriptional regulator, LuxR family  100 
 
 
222 aa  426  1e-118  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.46664  n/a   
 
 
-
 
NC_008726  Mvan_5522  two component LuxR family transcriptional regulator  69.51 
 
 
219 aa  276  2e-73  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_3475  response regulator receiver  66.05 
 
 
228 aa  255  4e-67  Gordonia bronchialis DSM 43247  Bacteria  normal  0.849127  n/a   
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  57.14 
 
 
221 aa  218  6e-56  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_008146  Mmcs_1619  two component LuxR family transcriptional regulator  67.47 
 
 
163 aa  204  1e-51  Mycobacterium sp. MCS  Bacteria  normal  0.113726  n/a   
 
 
-
 
NC_008705  Mkms_1644  two component LuxR family transcriptional regulator  67.47 
 
 
163 aa  204  1e-51  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1592  two component LuxR family transcriptional regulator  67.88 
 
 
162 aa  203  2e-51  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  49.78 
 
 
227 aa  192  3e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  47 
 
 
220 aa  192  5e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013093  Amir_4433  two component transcriptional regulator, LuxR family  52.56 
 
 
215 aa  189  2.9999999999999997e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  48.47 
 
 
230 aa  189  4e-47  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  48.66 
 
 
229 aa  188  5e-47  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  50.93 
 
 
218 aa  188  5e-47  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  48.44 
 
 
226 aa  188  7e-47  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013947  Snas_0541  two component transcriptional regulator, LuxR family  49.54 
 
 
221 aa  188  7e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.318618  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  50.46 
 
 
218 aa  187  8e-47  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  51.16 
 
 
221 aa  187  1e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  47.69 
 
 
224 aa  186  2e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  47.44 
 
 
221 aa  186  2e-46  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  48.42 
 
 
239 aa  186  2e-46  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  47.81 
 
 
230 aa  185  6e-46  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  46.12 
 
 
225 aa  182  4.0000000000000006e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_009664  Krad_2518  two component transcriptional regulator, LuxR family  48.18 
 
 
225 aa  181  7e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  46.61 
 
 
226 aa  181  8.000000000000001e-45  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  48.15 
 
 
230 aa  180  2e-44  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  47.51 
 
 
222 aa  179  2.9999999999999997e-44  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  47.51 
 
 
221 aa  179  4e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  47.27 
 
 
225 aa  179  4e-44  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013595  Sros_5499  response regulator receiver protein  48.37 
 
 
213 aa  178  4.999999999999999e-44  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00659712  normal  0.108677 
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  48.2 
 
 
225 aa  178  5.999999999999999e-44  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000789071 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.39 
 
 
229 aa  178  5.999999999999999e-44  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  49.32 
 
 
225 aa  178  5.999999999999999e-44  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  45.62 
 
 
225 aa  177  9e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  45 
 
 
224 aa  177  1e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_014211  Ndas_4872  two component transcriptional regulator, LuxR family  47.69 
 
 
232 aa  177  1e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.247388  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  45 
 
 
241 aa  177  1e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  47.91 
 
 
215 aa  176  2e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013235  Namu_0523  two component transcriptional regulator, LuxR family  48.85 
 
 
230 aa  176  2e-43  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  47.09 
 
 
227 aa  176  2e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  45.74 
 
 
225 aa  177  2e-43  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.3 
 
 
225 aa  176  3e-43  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  48.37 
 
 
219 aa  176  3e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  48.67 
 
 
234 aa  176  3e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_009921  Franean1_6427  two component LuxR family transcriptional regulator  50.47 
 
 
238 aa  176  3e-43  Frankia sp. EAN1pec  Bacteria  normal  0.140089  normal  0.356444 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  46.48 
 
 
224 aa  176  3e-43  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  47.69 
 
 
234 aa  176  4e-43  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  45.37 
 
 
228 aa  175  5e-43  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  45.12 
 
 
218 aa  175  5e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  46.73 
 
 
217 aa  175  6e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_0857  two component transcriptional regulator, LuxR family  47.42 
 
 
219 aa  175  6e-43  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0762303  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  47.91 
 
 
217 aa  173  1.9999999999999998e-42  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  44.8 
 
 
261 aa  173  1.9999999999999998e-42  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  48.39 
 
 
220 aa  173  1.9999999999999998e-42  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  44.91 
 
 
226 aa  173  1.9999999999999998e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  45.41 
 
 
219 aa  173  1.9999999999999998e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_010717  PXO_04459  two-component system regulatory protein  44.5 
 
 
213 aa  172  2.9999999999999996e-42  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  49.78 
 
 
225 aa  172  3.9999999999999995e-42  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  45.29 
 
 
228 aa  172  3.9999999999999995e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  48.43 
 
 
226 aa  172  3.9999999999999995e-42  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  45.83 
 
 
219 aa  172  5e-42  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  46.33 
 
 
228 aa  172  5e-42  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013235  Namu_0651  two component transcriptional regulator, LuxR family  44.39 
 
 
241 aa  171  5.999999999999999e-42  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  45.62 
 
 
247 aa  171  6.999999999999999e-42  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  46.3 
 
 
219 aa  171  6.999999999999999e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  45.21 
 
 
218 aa  170  1e-41  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  47.44 
 
 
217 aa  171  1e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  45.37 
 
 
220 aa  171  1e-41  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_011071  Smal_1099  two component transcriptional regulator, LuxR family  44.5 
 
 
213 aa  170  1e-41  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  47.06 
 
 
219 aa  170  1e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  47 
 
 
220 aa  170  2e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  41.01 
 
 
224 aa  169  2e-41  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  48.86 
 
 
224 aa  169  2e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  47.69 
 
 
219 aa  169  2e-41  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  47.66 
 
 
225 aa  170  2e-41  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_012669  Bcav_0404  two component transcriptional regulator, LuxR family  47.17 
 
 
218 aa  169  2e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0987348  normal 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  44.7 
 
 
225 aa  169  3e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  47.2 
 
 
222 aa  169  3e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6351  two component LuxR family transcriptional regulator  45.58 
 
 
244 aa  169  3e-41  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_21600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.58 
 
 
222 aa  169  3e-41  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.49613  normal 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  47.73 
 
 
227 aa  169  4e-41  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  46.7 
 
 
215 aa  169  4e-41  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  43.67 
 
 
234 aa  169  4e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_008697  Noca_4896  response regulator receiver  46.95 
 
 
215 aa  169  4e-41  Nocardioides sp. JS614  Bacteria  normal  0.446448  normal  0.220667 
 
 
-
 
NC_013739  Cwoe_5656  two component transcriptional regulator, LuxR family  50.96 
 
 
222 aa  169  4e-41  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  49.07 
 
 
217 aa  169  4e-41  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2717  two component transcriptional regulator, LuxR family  45.87 
 
 
223 aa  168  5e-41  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  45.58 
 
 
220 aa  168  5e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  46.79 
 
 
221 aa  168  7e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013595  Sros_0609  response regulator receiver protein  45.58 
 
 
218 aa  168  7e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  48.42 
 
 
222 aa  168  7e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  46.98 
 
 
216 aa  167  8e-41  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.82 
 
 
226 aa  167  8e-41  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0625  two component transcriptional regulator, LuxR family  45.62 
 
 
216 aa  167  9e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.732521  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  46.54 
 
 
226 aa  167  1e-40  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_014210  Ndas_4857  two component transcriptional regulator, LuxR family  45.26 
 
 
234 aa  167  1e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.243741 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  44.14 
 
 
230 aa  167  1e-40  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  44.29 
 
 
239 aa  167  1e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_39200  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  46.3 
 
 
218 aa  167  1e-40  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.254077 
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  46.45 
 
 
215 aa  167  1e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  47.49 
 
 
225 aa  166  2e-40  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
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