More than 300 homologs were found in PanDaTox collection
for query gene Tpau_1031 on replicon NC_014158
Organism: Tsukamurella paurometabola DSM 20162



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_5381  biotin carboxylase/biotin carboxyl carrier protein  56.59 
 
 
579 aa  652    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_0849  carbamoyl-phosphate synthase L chain, ATP-binding  66.95 
 
 
583 aa  783    Salinispora tropica CNB-440  Bacteria  normal  normal  0.650439 
 
 
-
 
NC_009953  Sare_0792  carbamoyl-phosphate synthase L chain ATP-binding  67.98 
 
 
583 aa  790    Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00727726 
 
 
-
 
NC_013441  Gbro_1832  Carbamoyl-phosphate synthase L chain ATP- binding protein  85.57 
 
 
601 aa  990    Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2557  putative acyl-CoA carboxylase, alpha subunit  64.37 
 
 
587 aa  749    Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2451  carbamoyl-phosphate synthase subunit L  60.56 
 
 
576 aa  672    Ralstonia eutropha JMP134  Bacteria  normal  0.0140517  n/a   
 
 
-
 
NC_010002  Daci_5726  carbamoyl-phosphate synthase L chain ATP-binding  57.75 
 
 
575 aa  642    Delftia acidovorans SPH-1  Bacteria  normal  0.267998  normal  0.835782 
 
 
-
 
NC_013530  Xcel_1012  Carbamoyl-phosphate synthase L chain ATP- binding protein  62.4 
 
 
600 aa  709    Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.412146  n/a   
 
 
-
 
NC_013510  Tcur_4175  Carbamoyl-phosphate synthase L chain ATP- binding protein  63.74 
 
 
584 aa  720    Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5916  carbamoyl-phosphate synthase L chain ATP-binding  65.43 
 
 
587 aa  763    Frankia sp. EAN1pec  Bacteria  normal  normal  0.574289 
 
 
-
 
NC_013093  Amir_6396  Carbamoyl-phosphate synthase L chain ATP- binding  72.47 
 
 
588 aa  834    Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6500  Carbamoyl-phosphate synthase L chain ATP- binding  62.25 
 
 
589 aa  724    Catenulispora acidiphila DSM 44928  Bacteria  normal  0.450636  normal  0.501395 
 
 
-
 
NC_013595  Sros_1299  carbamoyl-phosphate synthase L chain ATP- binding protein  59.36 
 
 
579 aa  677    Streptosporangium roseum DSM 43021  Bacteria  normal  0.969977  normal 
 
 
-
 
NC_014151  Cfla_1034  Carbamoyl-phosphate synthase L chain ATP- binding protein  60.37 
 
 
599 aa  692    Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.707661 
 
 
-
 
NC_012803  Mlut_19240  acetyl-CoA carboxylase, biotin carboxylase  57.26 
 
 
591 aa  641    Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_05850  acetyl/propionyl-CoA carboxylase, alpha subunit  73.99 
 
 
591 aa  869    Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.79631 
 
 
-
 
NC_014165  Tbis_0691  carbamoyl-phosphate synthase L chain ATP- binding protein  62.29 
 
 
581 aa  731    Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0845  Carbamoyl-phosphate synthase L chain ATP- binding  60.44 
 
 
595 aa  677    Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_3538  Carbamoyl-phosphate synthase L chain ATP- binding  61.59 
 
 
591 aa  729    Catenulispora acidiphila DSM 44928  Bacteria  normal  0.206514  normal 
 
 
-
 
NC_009338  Mflv_4784  carbamoyl-phosphate synthase L chain, ATP-binding  81.23 
 
 
599 aa  971    Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.324654  normal 
 
 
-
 
NC_009664  Krad_3912  Carbamoyl-phosphate synthase L chain ATP-binding  58.8 
 
 
634 aa  653    Kineococcus radiotolerans SRS30216  Bacteria  normal  0.473809  normal  0.0845343 
 
 
-
 
NC_013235  Namu_4233  Carbamoyl-phosphate synthase L chain ATP- binding  66.1 
 
 
594 aa  783    Nakamurella multipartita DSM 44233  Bacteria  normal  0.213527  normal  0.607428 
 
 
-
 
NC_007777  Francci3_0698  carbamoyl-phosphate synthase L chain, ATP-binding  64.54 
 
 
585 aa  760    Frankia sp. CcI3  Bacteria  normal  normal  0.933214 
 
 
-
 
NC_011886  Achl_0174  Carbamoyl-phosphate synthase L chain ATP-binding  60.34 
 
 
591 aa  645    Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_3798  carbamoyl-phosphate synthase L chain ATP- binding protein  59.06 
 
 
583 aa  676    Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.608993 
 
 
-
 
NC_007908  Rfer_0868  carbamoyl-phosphate synthase L chain, ATP-binding  58.67 
 
 
577 aa  647    Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1137  Carbamoyl-phosphate synthase L chain ATP-binding  59.2 
 
 
605 aa  671    Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1031  Carbamoyl-phosphate synthase L chain ATP- binding protein  100 
 
 
602 aa  1210    Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_1325  carbamoyl-phosphate synthase L chain, ATP-binding  82.17 
 
 
602 aa  988    Mycobacterium sp. JLS  Bacteria  normal  0.727992  normal 
 
 
-
 
NC_013947  Snas_0782  Carbamoyl-phosphate synthase L chain ATP- binding protein  66.55 
 
 
582 aa  771    Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.742429  normal 
 
 
-
 
NC_009565  TBFG_13314  bifunctional protein acetyl-/propionyl-coenzyme A carboxylase alpha subunit accA3: biotin carboxylase + biotin carboxyl carrier protein  78.24 
 
 
600 aa  892    Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4367  Carbamoyl-phosphate synthase L chain ATP- binding protein  70.22 
 
 
584 aa  800    Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.830439  n/a   
 
 
-
 
NC_008146  Mmcs_1289  carbamoyl-phosphate synthase L chain, ATP-binding protein  82.17 
 
 
602 aa  988    Mycobacterium sp. MCS  Bacteria  normal  0.252747  n/a   
 
 
-
 
NC_011988  Avi_5845  biotin carboxylase  58.47 
 
 
578 aa  662    Agrobacterium vitis S4  Bacteria  normal  0.249832  n/a   
 
 
-
 
NC_014210  Ndas_3943  Carbamoyl-phosphate synthase L chain ATP-binding protein  64.49 
 
 
589 aa  730    Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.705932  normal 
 
 
-
 
NC_013169  Ksed_08190  acetyl/propionyl-CoA carboxylase, alpha subunit  64.54 
 
 
593 aa  743    Kytococcus sedentarius DSM 20547  Bacteria  normal  0.253328  normal  0.580973 
 
 
-
 
NC_013172  Bfae_21160  acetyl/propionyl-CoA carboxylase, alpha subunit  63.32 
 
 
592 aa  734    Brachybacterium faecium DSM 4810  Bacteria  normal  0.127791  n/a   
 
 
-
 
NC_008541  Arth_0096  carbamoyl-phosphate synthase L chain, ATP-binding  61.42 
 
 
587 aa  668    Arthrobacter sp. FB24  Bacteria  normal  0.800977  n/a   
 
 
-
 
NC_008541  Arth_1271  carbamoyl-phosphate synthase L chain, ATP-binding  63.19 
 
 
617 aa  724    Arthrobacter sp. FB24  Bacteria  normal  0.333406  n/a   
 
 
-
 
NC_013131  Caci_0809  Carbamoyl-phosphate synthase L chain ATP- binding  65.26 
 
 
587 aa  771    Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_3510  carbamoyl-phosphate synthase L chain, ATP-binding  67.12 
 
 
590 aa  772    Nocardioides sp. JS614  Bacteria  normal  0.221437  n/a   
 
 
-
 
NC_008705  Mkms_1306  carbamoyl-phosphate synthase L chain, ATP-binding  82.17 
 
 
602 aa  988    Mycobacterium sp. KMS  Bacteria  normal  0.0707012  normal  0.142834 
 
 
-
 
NC_008726  Mvan_1664  carbamoyl-phosphate synthase L chain, ATP-binding  81.56 
 
 
600 aa  971    Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_05670  acetyl/propionyl-CoA carboxylase, alpha subunit  62.5 
 
 
618 aa  729    Micrococcus luteus NCTC 2665  Bacteria  normal  0.512556  n/a   
 
 
-
 
NC_013521  Sked_25500  acetyl/propionyl-CoA carboxylase, alpha subunit  59.73 
 
 
593 aa  674    Sanguibacter keddieii DSM 10542  Bacteria  normal  0.196991  normal  0.172822 
 
 
-
 
NC_007005  Psyr_0500  carbamoyl-phosphate synthase subunit L  56.75 
 
 
577 aa  631  1e-179  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.193791  normal 
 
 
-
 
NC_008686  Pden_0323  carbamoyl-phosphate synthase L chain, ATP-binding  56.82 
 
 
588 aa  630  1e-179  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_3292  Carbamoyl-phosphate synthase L chain ATP-binding  56.11 
 
 
577 aa  624  1e-177  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3510  carbamoyl-phosphate synthase L chain, ATP-binding  58.16 
 
 
583 aa  610  1e-173  Acidovorax citrulli AAC00-1  Bacteria  normal  0.866354  normal  0.682914 
 
 
-
 
NC_009664  Krad_0532  Carbamoyl-phosphate synthase L chain ATP-binding  54.71 
 
 
575 aa  555  1e-157  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.290431  decreased coverage  0.00468194 
 
 
-
 
NC_007333  Tfu_1228  putative acyl-CoA carboxylase complex A subunit  52.7 
 
 
589 aa  554  1e-156  Thermobifida fusca YX  Bacteria  normal  0.358541  n/a   
 
 
-
 
NC_013721  HMPREF0424_1199  carbamoyl-phosphate synthase L chain, ATP binding domain protein  46.08 
 
 
637 aa  529  1e-149  Gardnerella vaginalis 409-05  Bacteria  n/a    hitchhiker  0.00000920632 
 
 
-
 
NC_009972  Haur_4207  acetyl-CoA carboxylase, biotin carboxylase  47.65 
 
 
588 aa  526  1e-148  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_2123  Carbamoyl-phosphate synthase L chain ATP-binding protein  46.9 
 
 
592 aa  496  1e-139  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_010816  BLD_1631  acetyl/propionyl-CoA carboxylase subunit alpha  43.58 
 
 
654 aa  484  1e-135  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_0730  Carbamoyl-phosphate synthase L chain ATP- binding  47.64 
 
 
588 aa  480  1e-134  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.858294  n/a   
 
 
-
 
NC_013922  Nmag_3094  Carbamoyl-phosphate synthase L chain ATP-binding protein  45.94 
 
 
611 aa  481  1e-134  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013743  Htur_1729  Carbamoyl-phosphate synthase L chain ATP- binding protein  45.84 
 
 
610 aa  478  1e-133  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013202  Hmuk_2575  Carbamoyl-phosphate synthase L chain ATP- binding  45.31 
 
 
613 aa  464  1e-129  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_008148  Rxyl_2464  carbamoyl-phosphate synthase L chain, ATP-binding protein  47.97 
 
 
580 aa  456  1e-127  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1619  Carbamoyl-phosphate synthase L chain ATP- binding protein  43.17 
 
 
581 aa  453  1.0000000000000001e-126  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011831  Cagg_2537  acetyl-CoA carboxylase, biotin carboxylase  46.37 
 
 
590 aa  445  1.0000000000000001e-124  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.232961  normal 
 
 
-
 
NC_013739  Cwoe_5538  Carbamoyl-phosphate synthase L chain ATP- binding protein  46.72 
 
 
596 aa  445  1e-123  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0551401 
 
 
-
 
NC_012029  Hlac_2540  Carbamoyl-phosphate synthase L chain ATP-binding  44.2 
 
 
626 aa  439  1e-121  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal  0.391908 
 
 
-
 
NC_009767  Rcas_4290  acetyl-CoA carboxylase, biotin carboxylase  43.43 
 
 
591 aa  434  1e-120  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.0509531 
 
 
-
 
NC_007955  Mbur_2426  pyruvate carboxylase subunit A  50.11 
 
 
498 aa  435  1e-120  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007005  Psyr_2467  carbamoyl-phosphate synthase subunit L  41.93 
 
 
649 aa  430  1e-119  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.30197  normal  0.0144387 
 
 
-
 
NC_009637  MmarC7_1342  pyruvate carboxylase subunit A  47.2 
 
 
494 aa  426  1e-118  Methanococcus maripaludis C7  Archaea  normal  0.492096  normal  0.0929613 
 
 
-
 
NC_004578  PSPTO_2736  biotin carboxylase/biotin-containing subunit  42.08 
 
 
649 aa  425  1e-118  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1065  acetyl-CoA carboxylase, biotin carboxylase  48.54 
 
 
448 aa  426  1e-118  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000015139  n/a   
 
 
-
 
NC_013216  Dtox_2602  acetyl-CoA carboxylase, biotin carboxylase  47.86 
 
 
447 aa  425  1e-117  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.000536628  normal 
 
 
-
 
NC_011365  Gdia_2052  acetyl-CoA carboxylase biotin carboxylase subunit  51.46 
 
 
447 aa  423  1e-117  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_007355  Mbar_A1587  pyruvate carboxylase subunit A  49.22 
 
 
493 aa  424  1e-117  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.482835  normal 
 
 
-
 
NC_009523  RoseRS_3603  acetyl-CoA carboxylase, biotin carboxylase  43.27 
 
 
590 aa  423  1e-117  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.105957 
 
 
-
 
NC_009634  Mevan_1351  pyruvate carboxylase subunit A  47.32 
 
 
506 aa  424  1e-117  Methanococcus vannielii SB  Archaea  normal  0.926439  n/a   
 
 
-
 
NC_013132  Cpin_1521  acetyl-CoA carboxylase, biotin carboxylase  50.35 
 
 
494 aa  423  1e-117  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009135  MmarC5_1333  pyruvate carboxylase subunit A  45.98 
 
 
497 aa  419  1e-116  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_007643  Rru_A2435  acetyl-CoA carboxylase biotin carboxylase subunit  50.22 
 
 
445 aa  419  1e-116  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.259885  n/a   
 
 
-
 
NC_009511  Swit_4698  acetyl-CoA carboxylase, biotin carboxylase  50.22 
 
 
450 aa  421  1e-116  Sphingomonas wittichii RW1  Bacteria  normal  0.641481  normal 
 
 
-
 
NC_008609  Ppro_2022  acetyl-CoA carboxylase, biotin carboxylase  49.53 
 
 
446 aa  422  1e-116  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0711095  n/a   
 
 
-
 
NC_010571  Oter_1675  acetyl-CoA carboxylase, biotin carboxylase  48.49 
 
 
454 aa  419  1e-116  Opitutus terrae PB90-1  Bacteria  normal  normal  0.130972 
 
 
-
 
NC_002939  GSU2019  acetyl-CoA carboxylase, biotin carboxylase  49.88 
 
 
446 aa  416  9.999999999999999e-116  Geobacter sulfurreducens PCA  Bacteria  normal  0.274625  n/a   
 
 
-
 
NC_013924  Nmag_4033  Carbamoyl-phosphate synthase L chain ATP-binding protein  50.78 
 
 
447 aa  418  9.999999999999999e-116  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_0421  acetyl-CoA carboxylase biotin carboxylase subunit  48.1 
 
 
448 aa  417  9.999999999999999e-116  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_2259  acetyl-CoA carboxylase biotin carboxylase subunit  48.32 
 
 
448 aa  417  9.999999999999999e-116  Synechococcus sp. CC9605  Bacteria  normal  0.571536  normal  0.652272 
 
 
-
 
NC_013037  Dfer_3259  Carbamoyl-phosphate synthase L chain ATP- binding  50.58 
 
 
501 aa  417  9.999999999999999e-116  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.0256085 
 
 
-
 
NC_009483  Gura_1826  acetyl-CoA carboxylase, biotin carboxylase  49.19 
 
 
446 aa  413  1e-114  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000136846  n/a   
 
 
-
 
NC_007335  PMN2A_1423  acetyl-CoA carboxylase biotin carboxylase subunit  47.87 
 
 
447 aa  412  1e-114  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0749  acetyl-CoA carboxylase, biotin carboxylase  51.04 
 
 
455 aa  414  1e-114  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.00000629358  n/a   
 
 
-
 
NC_013093  Amir_6229  Carbamoyl-phosphate synthase L chain ATP- binding  42.66 
 
 
643 aa  415  1e-114  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009976  P9211_00681  acetyl-CoA carboxylase biotin carboxylase subunit  47.56 
 
 
448 aa  413  1e-114  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_008820  P9303_03221  acetyl-CoA carboxylase biotin carboxylase subunit  47.65 
 
 
448 aa  414  1e-114  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_011832  Mpal_1009  pyruvate carboxylase subunit A  46.77 
 
 
491 aa  413  1e-114  Methanosphaerula palustris E1-9c  Archaea  normal  0.716898  normal  0.701682 
 
 
-
 
NC_009712  Mboo_1783  pyruvate carboxylase subunit A  48.04 
 
 
493 aa  412  1e-114  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.304639  normal 
 
 
-
 
NC_010338  Caul_2564  acetyl-CoA carboxylase biotin carboxylase subunit  49.66 
 
 
447 aa  409  1e-113  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009975  MmarC6_0611  pyruvate carboxylase subunit A  46.53 
 
 
497 aa  411  1e-113  Methanococcus maripaludis C6  Archaea  normal  0.937558  n/a   
 
 
-
 
NC_007794  Saro_2079  biotin carboxylase / acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha  48.44 
 
 
448 aa  409  1e-113  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.252313  n/a   
 
 
-
 
NC_008942  Mlab_0138  pyruvate carboxylase subunit A  48.15 
 
 
500 aa  412  1e-113  Methanocorpusculum labreanum Z  Archaea  normal  0.732252  normal 
 
 
-
 
NC_013205  Aaci_1784  acetyl-CoA carboxylase, biotin carboxylase  49.12 
 
 
447 aa  409  1e-113  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1016  acetyl-CoA carboxylase, biotin carboxylase  47.87 
 
 
446 aa  410  1e-113  Candidatus Desulforudis audaxviator MP104C  Bacteria  unclonable  0.0000000161184  n/a   
 
 
-
 
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