16 homologs were found in PanDaTox collection
for query gene Tpau_0332 on replicon NC_014158
Organism: Tsukamurella paurometabola DSM 20162



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014158  Tpau_0332  secretion protein snm4  100 
 
 
528 aa  1028    Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_0081  hypothetical protein  25.86 
 
 
508 aa  124  5e-27  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0282118  normal  0.0438022 
 
 
-
 
NC_009077  Mjls_0063  hypothetical protein  29.66 
 
 
487 aa  119  1.9999999999999998e-25  Mycobacterium sp. JLS  Bacteria  normal  normal  0.0508702 
 
 
-
 
NC_008146  Mmcs_0073  hypothetical protein  29.12 
 
 
509 aa  117  6.9999999999999995e-25  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0082  hypothetical protein  29.66 
 
 
487 aa  111  3e-23  Mycobacterium sp. KMS  Bacteria  normal  0.201998  decreased coverage  0.00368698 
 
 
-
 
NC_009565  TBFG_13912  transmembrane protein  26.33 
 
 
479 aa  110  4.0000000000000004e-23  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.000000584195  normal  0.954546 
 
 
-
 
NC_009338  Mflv_0764  hypothetical protein  27.97 
 
 
486 aa  97.4  5e-19  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_1682  secretion protein snm4  24.72 
 
 
515 aa  94.4  5e-18  Gordonia bronchialis DSM 43247  Bacteria  normal  0.655612  n/a   
 
 
-
 
NC_009339  Mflv_5455  Fis family transcriptional regulator  29.33 
 
 
473 aa  72.8  0.00000000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008703  Mkms_5780  hypothetical protein  25.47 
 
 
505 aa  68.9  0.0000000002  Mycobacterium sp. KMS  Bacteria  decreased coverage  0.00948256  normal  0.178087 
 
 
-
 
NC_009565  TBFG_13922  transmembrane protein  24.32 
 
 
509 aa  51.6  0.00004  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_04370  secretion protein snm4  29.41 
 
 
464 aa  51.2  0.00004  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.435165 
 
 
-
 
NC_013093  Amir_6572  secretion protein snm4  37.84 
 
 
464 aa  50.1  0.0001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_1816  NADH dehydrogenase subunit M  26.7 
 
 
517 aa  45.1  0.003  Sulfurimonas denitrificans DSM 1251  Bacteria  hitchhiker  0.0000292544  n/a   
 
 
-
 
NC_008726  Mvan_0420  hypothetical protein  31.13 
 
 
485 aa  45.4  0.003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.50616 
 
 
-
 
NC_013947  Snas_0678  secretion protein snm4  25.06 
 
 
465 aa  43.5  0.01  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.939743  normal  0.247283 
 
 
-
 
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