More than 300 homologs were found in PanDaTox collection
for query gene Tmel_1579 on replicon NC_009616
Organism: Thermosipho melanesiensis BI429



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009616  Tmel_1579  methyl-accepting chemotaxis sensory transducer  100 
 
 
565 aa  1103    Thermosipho melanesiensis BI429  Bacteria  normal  0.327894  n/a   
 
 
-
 
NC_009486  Tpet_1365  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
566 aa  355  1e-96  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1321  methyl-accepting chemotaxis sensory transducer  37.04 
 
 
566 aa  350  4e-95  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.00082247  n/a   
 
 
-
 
NC_009486  Tpet_0550  methyl-accepting chemotaxis sensory transducer  43.65 
 
 
660 aa  263  6e-69  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.00000171017  n/a   
 
 
-
 
NC_010483  TRQ2_0564  methyl-accepting chemotaxis sensory transducer with Cache sensor  43.65 
 
 
660 aa  263  6.999999999999999e-69  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.0020921  n/a   
 
 
-
 
NC_007498  Pcar_1985  methyl-accepting chemotaxis protein (MCP)  30.86 
 
 
715 aa  241  4e-62  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0837  methyl-accepting chemotaxis sensory transducer  37.24 
 
 
667 aa  237  6e-61  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3394  methyl-accepting chemotaxis sensory transducer  29.77 
 
 
664 aa  235  1.0000000000000001e-60  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000171268  n/a   
 
 
-
 
NC_010003  Pmob_0137  methyl-accepting chemotaxis sensory transducer  39.39 
 
 
748 aa  234  4.0000000000000004e-60  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_1607  methyl-accepting chemotaxis sensory transducer  37.4 
 
 
668 aa  234  5e-60  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0228  methyl-accepting chemotaxis sensory transducer  36.88 
 
 
667 aa  233  7.000000000000001e-60  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0509  methyl-accepting chemotaxis sensory transducer  38.36 
 
 
666 aa  233  7.000000000000001e-60  Petrotoga mobilis SJ95  Bacteria  hitchhiker  0.0000844427  n/a   
 
 
-
 
NC_009092  Shew_2119  methyl-accepting chemotaxis sensory transducer  30.92 
 
 
548 aa  233  8.000000000000001e-60  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0496  methyl-accepting chemotaxis sensory transducer  38.36 
 
 
670 aa  231  2e-59  Petrotoga mobilis SJ95  Bacteria  normal  0.474098  n/a   
 
 
-
 
NC_009616  Tmel_0322  methyl-accepting chemotaxis sensory transducer  43.01 
 
 
662 aa  232  2e-59  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0749  methyl-accepting chemotaxis sensory transducer  35.64 
 
 
657 aa  230  6e-59  Thermosipho melanesiensis BI429  Bacteria  normal  0.388814  n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  27.08 
 
 
564 aa  229  8e-59  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2659  methyl-accepting chemotaxis protein  27.71 
 
 
556 aa  229  1e-58  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2596  methyl-accepting chemotaxis protein  26.72 
 
 
564 aa  229  1e-58  Vibrio cholerae O395  Bacteria  unclonable  0.00000000000057467  n/a   
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  28.54 
 
 
549 aa  228  2e-58  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_013456  VEA_001822  methyl-accepting chemotaxis protein  30.06 
 
 
557 aa  227  4e-58  Vibrio sp. Ex25  Bacteria  unclonable  0.00000124429  n/a   
 
 
-
 
NC_009486  Tpet_0009  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
661 aa  223  8e-57  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0861  methyl-accepting chemotaxis sensory transducer  35.45 
 
 
689 aa  219  7.999999999999999e-56  Petrotoga mobilis SJ95  Bacteria  normal  0.63678  n/a   
 
 
-
 
NC_009439  Pmen_2174  methyl-accepting chemotaxis sensory transducer  28.89 
 
 
544 aa  218  2e-55  Pseudomonas mendocina ymp  Bacteria  normal  decreased coverage  0.00506259 
 
 
-
 
NC_007005  Psyr_1776  histidine kinase, HAMP region: chemotaxis sensory transducer  27.84 
 
 
543 aa  218  2.9999999999999998e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.363817 
 
 
-
 
NC_010483  TRQ2_0515  methyl-accepting chemotaxis sensory transducer  36.94 
 
 
656 aa  216  9e-55  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  27.27 
 
 
549 aa  215  9.999999999999999e-55  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2825  methyl-accepting chemotaxis sensory transducer  28.76 
 
 
570 aa  216  9.999999999999999e-55  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000443347 
 
 
-
 
NC_011004  Rpal_4941  methyl-accepting chemotaxis sensory transducer  29.83 
 
 
563 aa  216  9.999999999999999e-55  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.396774  n/a   
 
 
-
 
NC_010483  TRQ2_0009  methyl-accepting chemotaxis sensory transducer  36.71 
 
 
661 aa  215  1.9999999999999998e-54  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0696  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.98 
 
 
659 aa  214  1.9999999999999998e-54  Petrotoga mobilis SJ95  Bacteria  normal  0.738999  n/a   
 
 
-
 
NC_010483  TRQ2_0922  methyl-accepting chemotaxis sensory transducer  36.71 
 
 
656 aa  214  2.9999999999999995e-54  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0900  methyl-accepting chemotaxis sensory transducer  37.25 
 
 
655 aa  213  4.9999999999999996e-54  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0461  methyl-accepting chemotaxis sensory transducer  27.4 
 
 
569 aa  214  4.9999999999999996e-54  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  27.01 
 
 
548 aa  213  5.999999999999999e-54  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  27.59 
 
 
558 aa  212  1e-53  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2601  chemotaxis sensory transducer  28.4 
 
 
569 aa  211  2e-53  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.441915  normal  0.36116 
 
 
-
 
NC_003910  CPS_4964  methyl-accepting chemotaxis protein  27.48 
 
 
545 aa  211  3e-53  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2757  methyl-accepting chemotaxis sensory transducer  26.17 
 
 
544 aa  211  3e-53  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1983  methyl-accepting chemotaxis sensory transducer  29.24 
 
 
548 aa  209  7e-53  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000213036  normal  0.437149 
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  27.93 
 
 
584 aa  209  1e-52  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  28.16 
 
 
554 aa  208  2e-52  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0581  methyl-accepting chemotaxis sensory transducer  28.55 
 
 
554 aa  206  8e-52  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  28.07 
 
 
584 aa  205  1e-51  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_2920  methyl-accepting chemotaxis sensory transducer  24.78 
 
 
544 aa  205  2e-51  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_0042  methyl-accepting chemotaxis sensory transducer  27.82 
 
 
565 aa  205  2e-51  Pelobacter propionicus DSM 2379  Bacteria  normal  0.121118  n/a   
 
 
-
 
NC_009512  Pput_2828  methyl-accepting chemotaxis sensory transducer  25.14 
 
 
544 aa  204  3e-51  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_3858  methyl-accepting chemotaxis sensory transducer with Cache sensor  27.41 
 
 
526 aa  203  7e-51  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  27.83 
 
 
585 aa  202  9e-51  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_012918  GM21_3709  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.04 
 
 
546 aa  202  9.999999999999999e-51  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009831  Ssed_0837  methyl-accepting chemotaxis sensory transducer  31 
 
 
554 aa  202  9.999999999999999e-51  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2861  methyl-accepting chemotaxis sensory transducer  24.6 
 
 
544 aa  201  1.9999999999999998e-50  Pseudomonas putida KT2440  Bacteria  normal  normal  0.445183 
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  28.37 
 
 
563 aa  201  1.9999999999999998e-50  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_0079  methyl-accepting chemotaxis sensory transducer with Cache sensor  26.67 
 
 
588 aa  202  1.9999999999999998e-50  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.031352  n/a   
 
 
-
 
NC_009654  Mmwyl1_0877  methyl-accepting chemotaxis sensory transducer  26.47 
 
 
540 aa  200  5e-50  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.11332 
 
 
-
 
NC_008700  Sama_2327  putative methyl-accepting chemotaxis sensory transducer  28.6 
 
 
554 aa  200  6e-50  Shewanella amazonensis SB2B  Bacteria  normal  0.644098  normal  0.637343 
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  28.28 
 
 
554 aa  199  9e-50  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  28.28 
 
 
554 aa  199  1.0000000000000001e-49  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  27.45 
 
 
567 aa  199  1.0000000000000001e-49  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_011145  AnaeK_3775  methyl-accepting chemotaxis sensory transducer  26.09 
 
 
526 aa  199  1.0000000000000001e-49  Anaeromyxobacter sp. K  Bacteria  normal  0.268134  n/a   
 
 
-
 
NC_010506  Swoo_2617  methyl-accepting chemotaxis sensory transducer  29.96 
 
 
548 aa  199  1.0000000000000001e-49  Shewanella woodyi ATCC 51908  Bacteria  normal  0.224982  normal  0.210295 
 
 
-
 
NC_009616  Tmel_1120  methyl-accepting chemotaxis sensory transducer  35.37 
 
 
664 aa  198  2.0000000000000003e-49  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00177625  n/a   
 
 
-
 
NC_007760  Adeh_3718  methyl-accepting chemotaxis sensory transducer  27.11 
 
 
526 aa  198  2.0000000000000003e-49  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.734846  n/a   
 
 
-
 
NC_009784  VIBHAR_05691  histidine kinase  25.4 
 
 
538 aa  199  2.0000000000000003e-49  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008345  Sfri_2212  methyl-accepting chemotaxis sensory transducer  29.6 
 
 
549 aa  198  2.0000000000000003e-49  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1776  methyl-accepting chemotaxis sensory transducer  35.37 
 
 
664 aa  198  2.0000000000000003e-49  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0868  methyl-accepting chemotaxis protein  27.67 
 
 
536 aa  197  3e-49  Vibrio cholerae O395  Bacteria  hitchhiker  0.000231989  n/a   
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  28.28 
 
 
554 aa  197  3e-49  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0113  chemotaxis sensory transducer  32.55 
 
 
563 aa  197  5.000000000000001e-49  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0078  methyl-accepting chemotaxis sensory transducer with Cache sensor  26.94 
 
 
588 aa  197  6e-49  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.857462  n/a   
 
 
-
 
NC_007643  Rru_A0158  methyl-accepting chemotaxis sensory transducer  24.96 
 
 
561 aa  197  6e-49  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.09 
 
 
554 aa  197  6e-49  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_2874  methyl-accepting chemotaxis sensory transducer  28.02 
 
 
563 aa  196  7e-49  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.872696  normal  0.485865 
 
 
-
 
NC_007298  Daro_2728  chemotaxis sensory transducer  27.32 
 
 
544 aa  196  8.000000000000001e-49  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.00837045  normal  0.306222 
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  27.01 
 
 
587 aa  196  1e-48  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_007963  Csal_1423  methyl-accepting chemotaxis sensory transducer  27.41 
 
 
584 aa  196  1e-48  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_0128  methyl-accepting chemotaxis sensory transducer  29.9 
 
 
663 aa  196  1e-48  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.0154965  n/a   
 
 
-
 
NC_009483  Gura_3045  methyl-accepting chemotaxis sensory transducer  28.57 
 
 
563 aa  194  5e-48  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000317109  n/a   
 
 
-
 
NC_011830  Dhaf_3478  methyl-accepting chemotaxis sensory transducer with Cache sensor  27.8 
 
 
594 aa  193  6e-48  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.233037  n/a   
 
 
-
 
NC_007298  Daro_3112  chemotaxis sensory transducer  27.11 
 
 
541 aa  192  2e-47  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  26.97 
 
 
585 aa  192  2e-47  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  26.49 
 
 
554 aa  191  2e-47  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3699  methyl-accepting chemotaxis protein  27.52 
 
 
543 aa  191  2.9999999999999997e-47  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3600  methyl-accepting chemotaxis sensory transducer  28.87 
 
 
546 aa  191  2.9999999999999997e-47  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_4018  methyl-accepting chemotaxis sensory transducer  26.56 
 
 
713 aa  191  4e-47  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000208845  n/a   
 
 
-
 
NC_010681  Bphyt_0557  methyl-accepting chemotaxis sensory transducer  27.11 
 
 
627 aa  191  4e-47  Burkholderia phytofirmans PsJN  Bacteria  normal  0.191348  normal  0.480006 
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  27.82 
 
 
554 aa  190  5e-47  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_0824  methyl-accepting chemotaxis sensory transducer  27.61 
 
 
554 aa  190  5e-47  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00067966 
 
 
-
 
NC_010551  BamMC406_2751  methyl-accepting chemotaxis sensory transducer  26.44 
 
 
521 aa  190  5.999999999999999e-47  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_2181  methyl-accepting chemotaxis sensory transducer  25.77 
 
 
606 aa  190  7e-47  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.440189  normal  0.953277 
 
 
-
 
NC_008576  Mmc1_3547  methyl-accepting chemotaxis sensory transducer  26.23 
 
 
676 aa  189  1e-46  Magnetococcus sp. MC-1  Bacteria  normal  0.126617  normal 
 
 
-
 
NC_009831  Ssed_3532  methyl-accepting chemotaxis sensory transducer  28.71 
 
 
555 aa  189  2e-46  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0673  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.29 
 
 
533 aa  187  4e-46  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.349323 
 
 
-
 
NC_011138  MADE_03718  putative chemotaxis sensory protein  27.89 
 
 
540 aa  187  4e-46  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0144  methyl-accepting chemotaxis sensory transducer  35.16 
 
 
537 aa  187  5e-46  Thermosipho melanesiensis BI429  Bacteria  unclonable  0.00000389108  n/a   
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  26.13 
 
 
554 aa  187  5e-46  Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_013522  Taci_0320  methyl-accepting chemotaxis sensory transducer  31.41 
 
 
588 aa  187  6e-46  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.415929  n/a   
 
 
-
 
NC_009997  Sbal195_1793  methyl-accepting chemotaxis sensory transducer  26.03 
 
 
533 aa  186  8e-46  Shewanella baltica OS195  Bacteria  normal  0.0175347  normal  0.776493 
 
 
-
 
NC_008390  Bamb_2891  methyl-accepting chemotaxis sensory transducer  26.25 
 
 
521 aa  186  8e-46  Burkholderia ambifaria AMMD  Bacteria  normal  0.657214  n/a   
 
 
-
 
NC_008836  BMA10229_A1435  methyl-accepting chemotaxis protein  26.27 
 
 
546 aa  186  1.0000000000000001e-45  Burkholderia mallei NCTC 10229  Bacteria  normal  0.631191  n/a   
 
 
-
 
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